Sturnira hondurensis: 118987450
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Entry
118987450 CDS
T07222
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
shon
Sturnira hondurensis
Pathway
shon05016
Huntington disease
shon05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
118987450 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
118987450 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118987450 (HTT)
04131 Membrane trafficking [BR:
shon04131
]
118987450 (HTT)
03029 Mitochondrial biogenesis [BR:
shon03029
]
118987450 (HTT)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118987450 (HTT)
Membrane trafficking [BR:
shon04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118987450 (HTT)
Mitochondrial biogenesis [BR:
shon03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118987450 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
118987450
NCBI-ProteinID:
XP_036902538
LinkDB
All DBs
Position
Unknown
AA seq
3129 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQPPPPPSQPPQPPPPQPPPPPPPPPPPPGPAVAEEQL
PRPKKEHSATKKDRVTHCLTICESIVAQSLRNSPEFQKLLGVAVELFLLCSDDAEADVRM
VADECLNKVIKALMDSSLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPY
LVNLLPCLTRTSRRPEESVQETLAAALPKIMASFGNFANDNEIKVLLKAFLANLKSSSPT
VRRTAASCAVSICQHSRRTQYFYSWLLSVLLGLLAPVADEPPPLLVLGVLLALRGLVPLL
QQQGQDTSLKGSFGVTRKETEVSPSTEQLVQVYELTLRYAQHPDHNVVTGALELLQQLLR
TPPPTLLRALTTPGGLAQLGAPSREPGGRSRSGSIVELIAGGGSSCSPVLPRKQQGKELF
EEAAALEDDSEPRSEGSSPAFAASVKGEICGGLAASPGVSTPGSASSAAAATDHDIITEQ
PRAQHTLQPDAVDLASCDLTSAITDGDEEDILSHSSSQISTVPSDVAVDLNDGTQASSPI
SDSSQTSTEGPDSAVTPSDSSEIVLDGTDGQYLGLQLGPPREEEEEEPSGLLADKDSVAS
PHSAVDSPFPEALQQARVLESTGPRRQLSDSVVDKFVSRDETADPGDQENKPCRIKGDIG
QSTDEDSAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCLGAAVALHPESLF
SKLYKAPPDAAEYPEEQCVSDVVNYIGHGDPQVRGATAVLCGTLLCSTLSRSRFQVGDWL
GSVRTRTGSTFSLVDCVPLLQRALKDESSVACKLACTAVRHCVMSLCSSSYSDLGLQLIT
DVLSLRSSSYWLVRTELLETLAEVDFRLVSFLEAKAEHLHRGAHHYTGLLKLQERVLNNV
VIHLLGDEDPRVRHVAAASLMRLVPKLFYQCDQGQADPVVAVARDQSSVYLKLLMHEAQP
ASHLSVGSITRIYRGYNLLPSITDVTMENNLSRVIAAVSQQLVTATTRALTFGCCEALCL
LSTAFPVCIWSLGWHCGVPPLSAADEGRKSCTVGMVTTVLTLLSSAWFPLDLSAHQDALI
LAGNLLAASAPKSLRSSWATEEEAGPAASKPEEVWPALGDRSLVPMVEQLFSHLLKVVNI
CAHVLDEVAPGPAAKAALPSLANPPSLSPIRRKGKEKEPGEQASVPLSPKRGSEASPASR
QSEGSGPVTASKSSSLGSFYHLPSYLRLHDVLKATHANYKVTLDLQNSTEKFGGFLRSAL
DVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGL
SSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRTMVQAEQDRDASGWF
DVLQKVSTQLKTNLTSVTKNRADKSAIHSHIRLFEPLVIKALKQYTTTTSVQLQRQVLDL
LAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHS
KQIIGIPKIIQLCDGVMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVV
VSMLLRLIQYHQVLEMFVLVLQQCHKESEDKWKRLSRQVADIILPMLARQQMHIDSHEAL
GVLNTLFEVLAPSSLRPVDMLLRSMFVTPATLASVSTVQLWISGILAILRVLISQSTEDI
VLSRIQELSLSPHLVSCPVISRLRGGDSSSSTAGGHSEGRLEKTLPEETLSRFLLQLVGV
LLEDIATKQPRVEMSEQQHTFYCQELGTLLMCLVHIFKSGMFRRITAAASRLFTGDGAEG
SFYSLESLNARVRSLVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLG
PLVSEEEEDPDLASTLGTCSREIVRRGALILFCDYVCQNLHDSEHLTWLVVNHIQDLISL
SHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPATLKKTLQCLEGIHLSQSGAVLT
LYVDKLLCTPFRVLARMVDTLACRRVEMLLAANVQTSAAQLPAEELHRIQEHLQSSGLAQ
RHQRLYSLLDRLRLATAPGSRGPSPPVTAHPLDGDGPLALETVSPDKDWYLRLVKSQCWT
RSDSALLEGAELVNRIPAGDMRAFMLNSEFNVSLLTPCLGLGAREISGGQKSPLFEAARV
ATLDRVTGVVQQLPAAHHVFQPFLPAEPAAYWSQLSDLFGDAVLYRSLTTLARALAQYLL
VSPKLPGHLHLPLEKERDTVKFVVATLEALSWHLVHEHVPLSLDLQAGLDCCCLALRLPS
LWSLLASPEMVTHACSLIHCVRFILEAIVVQPGDQLLGPERRTDTPAAAREDTDSHTQSP
EYVTAACRMVAEMVESLPCVLALGHKRNSNTPAFLTPVLRNIVISLARLPLVNSYTRIPP
LVWKLGWSPTPGGDFGTAFPEVPVEFLQEKEVFREFVFRINTLGWTSRTQFEETWATLLG
VLVTQPLVMEQEESPPEEDTERTQINVLAVRAITSLVLSAMTVPVAGNPAVSCLEQQPRN
KPLKALDTRFGRKLSVIRGIVEQEIQAMVSKRENVATHHLYQAWDPVPSLSPATTGALIS
HDKLLLQTNAERELGSVGYQLGQVSIHSVWLGNSITPLREEEWDEEEEEEADVPAPSSPP
LSPVNSRKHRAGVDIHSCSQFLLELYSRWVLPSGSARRIPVALVSEVVRSLLVVSDLFTE
RSQFEMMYLTLTELRRAHPSEDEILLQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRS
GHLPCKTGALHGVLYVLECDLLDDTAKQLIPVVCDHLLSSLRGAAHCVNVHSQQHVLVMC
ATAFYLVENYPLDVGPEFSASIIQMCGVMLSGSEESTPSTVYHCVLRGLERLLLSEQLSR
LDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKASPGRTSEPSPATPDSESVIV
AMERVSVLFDRIRKGFPWEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMA
TVVYQVFQTLHGTGQSSTVRDWVMLSLSNFTQRAPVAMAVWSLSCFFVSASTSPWVSAVL
PHVISRMGRLEQVDVNLFCLVAADFYRHQIEEELDRRAFQSVFEVVAAPGTPYQQLLACL
QNVHKVASC
NT seq
9390 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggagaagctgatgaaggccttcgaatccctcaagtctttccagcagcag
caacagcagcagccgccaccgccgccgtctcagccccctcagccgccgccgcctcaaccg
ccgccgcccccgccgccgcccccgccacctcctggtccggcagtggcggaggagcagctg
ccccgaccaaagaaagaacactctgccaccaagaaagaccgtgtgactcattgtctgaca
atatgtgaaagcatagtggcccagtctctcaggaattccccagaattccagaaactcctg
ggcgttgccgtggagctcttcctgctgtgcagtgacgatgccgaggcggacgtcaggatg
gtggctgacgagtgcctcaacaaagtcataaaagctctgatggactccagtctcccgagg
ctgcagttggagctctacaaagaaattaaaaagaatggtgctcctcgaagcctgcgtgct
gccctgtggaggtttgctgagctggctcacctggttcggccccagaaatgcaggccttac
ttggtgaaccttctgccttgcctgactcggacaagcaggagacccgaggaatctgtgcag
gagaccctggctgctgctctccccaaaatcatggcttcattcggcaactttgcaaatgac
aatgaaattaaggttctgttgaaggccttcctagcgaacctgaagtccagctccccgacg
gttcggcggacggcggccagctgcgcagtgagcatctgccagcactccaggaggacgcag
tacttctacagctggctgctcagcgtgctcttgggtctgctggctcccgtggcggacgag
cccccgcccctgctggtcctgggggtgctgctcgcgctgaggggcttggtgcctctgctg
cagcagcagggccaggacaccagcctgaaaggcagcttcggggtcacacggaaagagacg
gaggtgtccccctcgacagagcagctggtgcaggtgtacgagctgaccctgcgttacgcg
cagcacccagaccacaacgtggtgaccggggctctggagctcctgcagcagcttctccgg
accccgccccccacactgctgcgggccctgaccacgcctggcggcctggcccagcttgga
gcccccagccgggagcccggcgggcggagccgcagcgggagtattgtggagctgatagcc
ggagggggttcttcatgcagccctgtccttccaaggaagcagcaagggaaggagctcttc
gaggaagcggcagccctggaggacgactccgagccgaggtcggagggcagcagcccggcc
ttcgcagcctcagtcaagggcgagatctgtggggggctggctgcctctcccggggtctcc
actcctggctctgccagctcagctgctgccgccacagatcacgacatcatcaccgagcag
ccccgggcacagcacacgctgcagccggatgcagtggacctggccagctgcgacttaacg
agcgccatcaccgacggggacgaggaggacatcctgagccacagctccagccagatcagc
actgtcccgtccgacgtggccgtggacctgaatgacgggacgcaggcctcctcccccatc
agtgacagctcccagacctccaccgagggccccgattcggccgtgaccccttcagacagc
tctgagatcgtgttggacggcactgacggccagtacttggggctgcagctcggccctccg
cgggaggaggaggaggaggagccctcgggcctcctggcagacaaggactcggtcgcatcc
ccacactccgcagtcgattctccatttccggaagcccttcagcaagcacgtgtactggag
agcacgggcccccgcaggcagctgtctgacagcgttgtggataaatttgtgtccagagac
gagactgctgacccaggagaccaggaaaacaagccttgccggatcaaaggtgacatcgga
cagtctaccgacgaagattctgctcccctggttcattgcgtccgccttttatctgcttca
ttcttgctgactggggaaaaaaatgcgctggttccggatcgggacgtgcgggtcagcgtg
aaggcgctggcgctcagctgcctgggggccgctgtggcccttcatcccgagtctctcttc
agcaagctgtacaaagcccctcccgacgccgcggagtaccctgaggagcagtgcgtctcg
gatgtggtgaactacatcggccacggagacccgcaggtccgaggagccacggccgtgctc
tgcgggacgctcctgtgctccaccctcagccgctcccgcttccaggtgggagactggctg
gggtccgtccggactcggacagggagcacgttttctctggtggactgcgtccctctgctg
cagagagctctgaaggatgagtcttctgtcgcgtgcaagctggcgtgcacagctgtgcgg
cactgcgtcatgagcctctgcagcagcagctacagtgacctggggctgcagctgatcacc
gacgtgctgagcctgcggagcagctcctactggctggtgcggacggagctgctggagacg
ctcgcagaggtcgacttcaggttggtgagctttttggaagcaaaagcagaacacctgcac
agaggggcgcaccattacacagggctcttgaagctacaagaacgagtgctcaataacgtc
gtcatccacttgctcggggatgaagaccccagggtgcggcacgtcgctgctgcttcactg
atgaggctcgtccccaagctgttctatcagtgtgaccaagggcaggccgacccagtagtg
gctgtggctcgggaccaaagcagcgtctacctgaagctgctcatgcacgaggcgcagcct
gcgtcgcacctctccgtcggctccatcaccagaatatacagaggctacaacttgctacca
agcataactgatgtcaccatggagaacaacctgtccagagtcattgccgctgtgtcgcag
cagctcgtcacggccaccacgcgtgcactcacgtttggatgctgtgaagctttgtgtctt
ctctccacggcttttccagtttgcatctggagtttgggttggcattgtggggtgccccct
ctgagcgccgcggacgagggccggaagagctgcacggtcggcatggtcacgacggtcctc
accctgctctcgtcagcgtggttcccactggacctctcggcccaccaggacgctctgatc
ctggctggaaacctgctcgcagccagcgcccccaagtctctgaggagttcatgggccaca
gaagaggaggccggccctgccgccagcaagccggaggaggtgtggccggcgctgggggac
cgcagcctggtgcccatggtggagcagctcttctcccacctgctgaaggtggtcaacatc
tgcgcgcacgtgctggacgaggtggcgcctgggcccgccgcaaaggctgccctgccatcc
ctggcgaaccccccttctctgagccccatccgacggaaggggaaggagaaagagcctggt
gagcaggcttccgtgcctctgagccccaagagaggcagtgaggccagtccagcctcccgc
cagtcagaaggctcaggacctgtcacagccagtaaatcctcgtcgctggggagtttctac
caccttccttcgtacctcagactgcatgacgtcctgaaagccacccatgccaactacaag
gtcaccttggatctgcagaacagcacggagaagtttgggggctttctgcgctcggccctg
gacgtgctctcccagattctcgagttggcaacactgcaggacatcgggaagtgtgtcgag
gagatcctggggtacctgaaatcctgcttcagccgggagccgatgatggccacggtgtgc
gtgcagcagttgttgaagacgctcttcgggacgaacttggcctcccagtttgatggctta
tcatccaaccccagcaagtcccaaggccgagcccagcgccttggctcatccagcgtgagg
ccgggcctctaccactactgcttcatggctccgtacacccacttcacccaggccctggcg
gacgccagcctacggaccatggtgcaggcggagcaggaccgcgatgcctcggggtggttt
gacgtcctccagaaagtgtccacccagttgaagactaacctcaccagtgtcaccaagaac
cgtgcagacaagagcgccatccacagccacatccgcctgttcgagcccctggtcataaag
gcgctgaagcagtacacgaccaccacgtctgtgcagctgcagaggcaggtgctggacctg
ctggcacagctggtgcagctgcgcgtcaactactgtctcctggactcggaccaggtgttc
attggctttgtgctgaagcagtttgagtacattgaagtcggccagttcagggagtccgag
gccatcatccccaacatctttttcttcctggtcctgctgtcgtacgaacgctaccattcc
aagcagatcatcggcatccccaagatcatccagctctgtgacggcgtcatggccagcggc
aggaaggccgtgacgcacgccataccagctctgcagcccattgtccatgacctctttgtg
ttacgaggaaccaataaggctgatgcaggaaaggagctggaaacccagaaagaagtggta
gtgtcgatgcttctgaggctcatccagtaccaccaggtgctggagatgttcgttctcgtc
ctgcagcagtgccacaaggagagcgaagacaagtggaagcggctgtcccgacaggtcgct
gacatcatcctcccgatgctggccagacagcagatgcacatcgactcccacgaagccctc
ggcgtgttgaacactctgtttgaggtcctggccccttcctccctccggcctgtggacatg
ctgctgcggagcatgttcgtcaccccagccacactggcctctgtgagcaccgtccagctg
tggatctcaggaatcctggccatcctgagggttctcatctcccagtccacggaagatatc
gttctctctcgcattcaagagctgtccttgtctccgcatctggtctcctgccccgtaatt
agtaggttaagaggtggggacagcagcagctccacagcaggaggacacagcgaagggaga
ctggagaagaccttgccagaagaaactctctccaggttcctcctgcagctggtcggcgtc
ctcctggaggacatcgcgaccaagcagccgcgagtggagatgagcgagcagcagcacacc
ttctactgccaggagctgggcacgctgctcatgtgtctggttcacatcttcaagtccgga
atgttccggagaatcacagcagccgcttctagactcttcaccggggacggcgccgagggc
agtttctacagcctggagagcttgaatgcgcgggtgcgctccctggtccccacgcacccg
gccctcgtgctgctctggtgccagatcctgctgctcgtcagccacaccgactaccgctgg
tgggccgaggtgcagcagacccccagaagacgcagcctgtccagcacgaagtccctgggt
cccctggtgtctgaggaagaggaggaccccgacttggcatccacactgggaacgtgcagc
agggagatagtgcggcgaggggccctcatcctcttctgcgattacgtctgtcagaacctg
cacgactctgaacacctgacgtggctcgttgtgaatcacatccaggacctgatcagcctg
tcccatgagccccccgtgcaggacttcatcagcgccgtccaccggaactccgccgccagc
ggccttttcatccaggccattcagtcccgttgtgagaacctctccgcccctgccactctg
aagaagacccttcagtgcttggaagggatccacctcagccagtcgggcgctgtgttaacg
ctgtacgtggacaagcttttgtgcactccgttccgcgtgctggctcgcatggttgacacc
cttgcttgtcgccgggtggaaatgcttttggctgcgaatgtacagaccagcgcggcccag
ctgccggcggaagagctgcaccgaatccaggagcaccttcagagcagcggcctggcgcag
aggcaccagaggctctactccctgctggacaggctgcgtctcgccaccgcccctgggtcc
cgtggcccctctcctccagtcacagcccacccgctggatggggacgggcctctggcactg
gagactgtgagtccagacaaagactggtacctacgcctggtcaaatcccagtgctggaca
aggtccgactctgcgctgctggagggagcggagctggtgaatcggatccctgcaggtgac
atgcgtgcgttcatgctgaactcggagttcaacgtgagcctgctaaccccatgcctgggc
ctgggcgcgcgtgagatctccgggggccagaagagtcccctcttcgaagcggctcgtgtg
gcgactctggaccgcgtgaccggcgtggttcagcagctccccgctgcccatcacgtcttc
cagcccttcctgcccgcggagcccgccgcctactggagccagctgagcgaccttttcggg
gacgctgtgctgtaccgctccctgaccacactggcccgtgccctggcccagtacctgctc
gtgtcccccaagctacctggccacttgcaccttcctctggagaaggagagggacactgtg
aagttcgtggtcgcgaccctggaggcactctcctggcatctggtccacgagcacgtccca
ctgagcctggacctccaggcaggcctggactgctgctgcttggccctgcggctgcccagc
ctctggagcctgctggcctccccggagatggtgacccacgcctgctcgctcatccactgt
gtccgcttcatcctggaagccatcgtggtgcagcctggggaccagcttcttggtccagaa
aggaggacggacacccccgcagcagccagagaggacacagactcgcacacccagagccct
gagtacgttaccgcagcctgcaggatggtggcggagatggtggagtctttgccatgtgtg
ctggccttggggcataaaaggaacagcaacacccctgcatttctcacgccggtgctcagg
aacatcgtcatcagcctggcccgcttgcccctcgtcaacagctacacgcgcatcccccca
ctggtctggaaacttgggtggtcccctacgccaggaggggacttcggcacagccttcccc
gaggtccctgtggagttcctccaggaaaaggaggtcttccgagagttcgtcttccgcatc
aacacgctagggtggaccagccggacccagtttgaggagacatgggccaccctgctcggt
gtcctggtgactcagcccctcgtgatggagcaggaggagagcccaccggaagaggacacg
gagaggacccagatcaatgtcctggctgtgcgggccatcacctccctggtgctgagtgcg
atgaccgtgcccgtggccggcaacccagccgtgagctgcttggagcagcagccgcggaac
aagcccctgaaagctctcgacaccaggtttgggaggaagctgagcgtgatcagaggaatt
gtagagcaagagattcaagcaatggtttcgaagagggagaatgtcgccacccaccacttg
tatcaggcgtgggaccctgtgccatctctgtcccctgccactacaggtgccctcatcagc
cacgacaaactcctgctgcagaccaacgcggagcgggagctgggcagcgtgggctaccag
ctgggccaggtgtccatccactcagtgtggctggggaacagcatcacgcccctgagggag
gaggagtgggacgaggaggaggaggaagaggccgacgtccctgccccttcatcaccgcca
ctgtctccagtcaactccaggaagcaccgggccggggtggacatccactcctgctcccag
ttcttactcgagctgtacagtcgctgggtcctgccatcaggttcagcccggaggatccct
gttgccctggtcagcgaagtggttcgctctctcctggtggtctcggacttgttcacggag
cgcagccagtttgagatgatgtacctgacgctgaccgagctgcggagggcgcacccttcg
gaggacgagattctcctccagtacctggtgcccgccacctgcaaggcggctgcagtcctg
ggaatggacaaggcggtggcagagccggtcagtcggctgctggagagcacgctcaggagc
ggccatctgccctgcaagacgggggcgctgcacggcgtgctctacgtgctggagtgcgac
ctcctggatgacaccgccaagcagctcatcccggtcgtctgtgaccacctcctctccagc
cttcggggcgcggcccactgcgtgaatgtccacagccagcagcacgtgctggtgatgtgt
gccaccgccttctacctggtcgagaactacccgctggatgtggggcccgagttttctgca
tccattatacagatgtgtggggtgatgctgtccggaagcgaggagtccactccatccact
gtctaccactgcgtcctgcggggcctggagcgcctcctgctgtccgagcagctctcccgg
ctggacgcagagtccctggtcaagctcagtgtggacagagtgaacgtgcacagcccgcac
cgggccatggctgccctgggcctgatgctcacctgcatgtacacagggaaggagaaggcc
agtccaggccggacctctgagcccagccctgccacccctgacagtgagtccgtgatcgtg
gccatggagcgtgtgtccgtgcttttcgacaggatcaggaaaggcttcccctgggaagcc
cgcgtggtggcccggatcctcccgcagttcctagacgacttcttcccgccccaagatgtc
atgaataaggtcatcggggagttcctgtccaaccagcagccctacccgcagttcatggcc
accgtggtgtaccaggtgttccagacgctgcacggcacagggcagtcgtccacggtccgg
gactgggtcatgctgtccctctccaacttcacccagagggccccagttgccatggccgtg
tggagcctctcctgcttcttcgtcagcgcgtccaccagcccgtgggtctcagcagtcctc
ccccacgtcatcagcaggatgggcaggctggagcaggtggacgtaaacctcttctgcctg
gtggctgcggacttctacagacaccagattgaggaggagctggaccgccgggccttccag
tctgtgttcgaggtggtggcagcgccaggaacgccgtaccagcagctgctggcctgtttg
cagaacgtccacaaggtggcctcgtgctga
DBGET
integrated database retrieval system
