Sturnira hondurensis: 118987614
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Entry
118987614 CDS
T07222
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118987614 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118987614 (DHX16)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118987614 (DHX16)
Spliceosome [BR:
shon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118987614 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
Cas3-like_C_2
nSTAND3
Flavi_DEAD
SRP54
Motif
Other DBs
NCBI-GeneID:
118987614
NCBI-ProteinID:
XP_036902745
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MMTPAGLERWVQDELHSVLGLSERHVAQFLIGTAHRCGSAEEFVQRLRDTDTLDVSGPAR
DFALRLWNKVPRKTVVEKPARAAEREARALLEKNQSYKLLEDSEESSEETVGKAGNSLQK
KRKKRKHLRKKCQKEEDEEEEEVSEKGKKTGGSKQQTEKSESEDEWERTERERLQDLEER
DAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKR
EREKLEDLEAELADEEFLFGDVELSQHEQWELKYKRRVRDLAREYRAAGEQEKLEATNRY
HMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLE
EEETIEFVQATQLQGDEEPSAPPTSTQAQQKESIQAIRRSLPVYPFREDLLAAITNHQVL
IIEGETGSGKTTQIPQYLFEEGYTKNGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVG
YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKD
VARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVS
VLQIHVTQPPGDVLVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQAR
IFQPTPQGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKAS
ANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF
DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSE
EILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWC
YENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG
YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKA
KELEDPHAKKMPKKTGKTREELG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgccggcggggctggagcgctgggtacaggacgagctgcactcagtgctggga
ctaagcgagcggcacgtggctcagttcctgatcggcaccgcgcaccgttgcggctcggcg
gaggagttcgtgcagcgcctgcgagacacagataccctggacgttagcgggcccgccagg
gacttcgcgctgagactctggaacaaggtaccacggaagacggtagtagaaaagccagct
cgggcagctgagcgagaggcccgagcgctgctagagaagaaccaatcttataagttgctg
gaagacagtgaggagagcagtgaggagactgtgggtaaggctgggaacagtctccagaag
aagcgtaaaaaacggaaacacttgaggaaaaaatgccagaaggaggaagatgaagaagag
gaagaagtttcagagaaagggaagaagacaggggggagcaaacagcagacagagaagtct
gagtctgaggatgaatgggagcggacagaacgagagcgccttcaggacctggaggaacgt
gatgccttcgcagagcgggtccggcagcgggataaggatcggactcgaaatgtcctggag
cggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggctgaggaagac
cggaaagccatggttcctgagctgcggaagaaatctcgccgagagtacctagctaagcgg
gagcgagagaagcttgaggacctggaggctgagctggcggatgaggagttccttttcggg
gatgtggagctgagccaacatgagcagtgggagctcaaatacaagcggcgagtgcgggat
ctggcccgggagtaccgagcggcaggggagcaggaaaagctggaggccaccaatcgctac
cacatgccagaggagacccgaggacagccagcacgagctgtggatcttgtggaggaggaa
tcaggtgcccctggggaggagcagcgacgctgggaggaggcccgactgggggctgcctcc
ctgaagtttggggcccgagatgctgcttcccaggagcccaagtatcagttggtactagag
gaagaggagaccatcgagtttgtccaggccactcagctccagggtgacgaggagccgtca
gctccacccacttctacccaggcccaacagaaggagtccatccaggccatccgccgaagc
cttcctgtgtacccgttccgggaggatctcctggctgctattactaatcatcaggtcctc
attatcgagggtgaaacaggctcgggaaagaccacccaaatcccacagtatctctttgag
gagggttataccaagaatggtatgaagattgcctgcactcagcccaggagagtggctgcc
atgagtgtggctgcccgagtggcccgggagatgggtgtaaagcttgggaatgaggttggc
tacagcatccgctttgaggattgcacgtcagagcgaacagtcctccgctatatgacagat
gggatgcttcttcgagagttcctctctgagcccgaccttgcaagttacagtgtggtgatg
gtggatgaggctcatgagcggaccttgcacacagacatcctctttggattaatcaaagat
gttgctcgcttccgacctgagctcaaagttctggtggcttcagccacactggacacagcc
cgtttttccaccttctttgatgatgctccagtcttccgaatccctggacgccggtttcca
gttgacatcttctataccaaggctccagaggctgactacctggaagcctgtgtagtgtct
gtgctacaaattcatgtgacccagccccctggagatgttctagtgttcctgacagggcag
gaggagattgaggccgcttgcgagatgcttcaggatcgctgccgccgcctgggctccaaa
attagggagctgctggtgctacccatttatgccaatctgccttctgacatgcaggctcgc
atcttccagcccacgccgcagggggcacggaaggtggttgtggcaacgaacattgctgag
acttcactcacgattgagggcatcatttacgtgctggatccagggttctgtaagcagaag
agctacaacccccgcacaggaatggaatcactcacggtcacaccctgcagcaaggcttca
gccaatcagcgagctggtcgggcaggccgggtggctgcagggaagtgcttccgcctgtat
accgcttgggcctatcagcatgagctggaggagaccacggtgccagagatccaaaggacc
agcctaggcaatgttgtgttactgctcaagagcttagggattcatgacctcatgcacttt
gatttcctggaccctccaccctatgagactctgctgctggctttggagcagctgtatgct
ctgggagccctcaaccaccttggggagctcaccacgtctggtcgaaagatggcagagctg
ccagtggaccccatgctgtctaaaatgatcctggcctctgagaagtacagctgttcagag
gagatcctgacagtagctgccatgctgtctgtcaacaactccatcttctaccgacccaag
gacaaggtcgtccatgctgacaatgcccgtgtcaacttcttcctccctggtggggaccac
ttggttttgctaaacgtttatacacagtgggctgagagtggttactcttcacagtggtgc
tatgagaactttgtccagttcagatctatgcgccgagcacgggatgtacgggaacagctg
gagggactcttggagcgtgtggaagttggtctcagttcctgccagggggactatattcgt
gtacgcaaggccatcactgccggttacttttatcacacagcacggttgactagaagtggc
tacagaacagtgaagcaacaacagacagtgttcattcaccccaactcctccctctttgag
gaacagcctcgctggctgctctaccatgaacttgtcttgaccaccaaggagttcatgaga
caggtattggagattgagagcagttggcttctggaggtggcaccccactactataaggcc
aaggaactagaagatccccacgctaagaaaatgcccaaaaaaacaggcaagacgcgggaa
gaactagggtaa
DBGET
integrated database retrieval system
