Sturnira hondurensis: 118987705
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Entry
118987705 CDS
T07222
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118987705 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118987705 (XAB2)
03041 Spliceosome [BR:
shon03041
]
118987705 (XAB2)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118987705 (XAB2)
Spliceosome [BR:
shon03041
]
Complex B
Other components
Prp19-related factors
118987705 (XAB2)
Complex C
118987705 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
ARM_TT21_C
TPR_15
RPN7
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
118987705
NCBI-ProteinID:
XP_036902821
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAQMETASELGREEDDDVNLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATRVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPRYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSAAGTVSDLAPGQSGMDDMKLLEQRAEQLR
AEAEHDQPTRAQNKILFVRSDASREELAELAQQANPEEIELGEDEDDDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggatctggtctttgatgaagaa
gacctcccgtacgaggaggaaattatgcggaaccagttctccgtcaagtgctggctccgc
tacatcgagttcaaacagggggccccgaagcccaggcttaatcagctgtacgagcgagcc
ctaaagctgctgccctgcagctacaagctctggtaccgctatctgaaggcgcgccgggca
caggtgaagcatcgctgtgtcaccgaccctgcctatgaagacgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccgcgtctgtggctggactattgccagttcctg
atggaccagggccgcgtcactcatacccgccgcacttttgaccgtgccctccgggcgctg
cccatcactcagcactctcgcatttggcctctgtacctgcgcttcctgcgctcacaccca
ctgcctgagacagccgtgcgaggctaccggcgcttcctcaagctgagccctgagagtgca
gaggagtacatcgagtacctcaagtccagcgaccggctggatgaggccgcgcagcgcctg
gccaccgtggtgaatgatgagcgcttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctctcagaacccggacaaggtgcagtcgctgaacgtg
gacgccatcatccgggggggcctcacccgcttcactgaccagctgggcaagctctggtgc
tctctggccgactactacatccgcagtggtcacttcgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctatgcc
cagtttgaggagagcatgattgcagctcagatggagaccgcttctgagctggggcgggag
gaggatgacgatgtgaacctggagctgcgactggcccgcttcgagcagctcatcagccgg
cggcccctgctgctcaacagcgtcctgctgcgccagaacccacaccacgtgcacgagtgg
cacaaacgtgtggccctgcaccagggccgcccccgggagatcatcaacacatacacggag
gccgtgcagacggtggaccccttcaaggccacgggcaagccccacacactgtgggtagca
ttcgccaagttctacgaggacaatgggcagctggatgacgcccgcgtcatcctggagaag
gccaccagggtgagcttcaagcaggtggacgacctggccagtgtgtggtgtgagtgtggt
gagctggagctccggcacgagaattatgaccaggccttgcggctgctgcggaaggctaca
gcgctgcctgcccgccgggctgaatactttgatggctcggagcccgtgcagaaccgcgtg
tacaagtccctgaaggtgtggtccatgcttgccgacctggaggagagccttggcaccttc
cagtccaccaaggccgtgtatgaccgcattctggacctgcgcatcgccacgccccagatc
gtcattaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggca
tacgagcgaggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaagttcatcgcccgctatgggggccgcaagctggagcgggcgcgggacctcttt
gagcaggcgctagacggctgcccaccaagatatgccaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcatgctatggccgtgtacgagcgcgccacc
caggctgtggaacctgcccagcagtacgacatgttcaacatctacatcaagcgggccgcg
gagatctacggcgtcacccacacccgcggcatctaccagaaggccatcgaggtgctttca
gacgagcacgcccgggagatgtgcctgcggttcgcagacatggagtgcaagctgggggag
attgaccgcgcccgggccatctacagcttctgctcccagatctgcgacccccggacgact
ggcgccttctggcagacgtggaaggacttcgaggtgcggcacggcaacgaggacaccatc
cgggagatgctgcgcatccgccgcagcgtgcaggccacgtacaacacgcaagtcaacttc
atggcctcccagatgctcaaggtgtcgggcagcgccgcgggcactgtgtccgacctggcc
ccagggcagagcggcatggatgacatgaagctgctcgagcagcgggccgagcaactgaga
gctgaggccgagcatgaccagcccacacgggctcagaacaagatcctgtttgtgaggagc
gacgcgtcccgggaggagctggccgagctggcccagcaagccaacccggaggagattgaa
ctgggcgaggacgaggacgatgacgagatggacctggagcccaacgaggtgcggctggag
cagcagagcgtgccagcagctgtgtttgggagtctgaaggaagactga
DBGET
integrated database retrieval system
