Sturnira hondurensis: 118988100
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Entry
118988100 CDS
T07222
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
shon
Sturnira hondurensis
Pathway
shon03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118988100 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118988100 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
shon03019
]
118988100 (SUPT5H)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118988100 (SUPT5H)
RNA polymerase I system
118988100 (SUPT5H)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
118988100 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
118988100
NCBI-ProteinID:
XP_036903385
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEEE
DDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSG
ARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWT
VKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEG
VGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQN
TISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIF
EGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQ
PGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVI
AGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQ
LDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVK
VIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGG
FAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSG
SRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD
DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS
YQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPG
GYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEK
VVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL
GKLLEA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctctgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggagcggcggagtgcagcaggcagtgagaaggaggaagag
cctgaggaagaagaagaggaagaagaagaagaagaatatgatgaggaagaagaggaggaa
gatgatgatcggcctcccaagaaaccccgccatggtggcttcattctggatgaggctgat
gtggatgacgagtacgaggatgaggaccagtgggaggacggagcagaggacatcctagag
aaagaagagattgaagcctccaatatcgataatgttgtcctggatgaagaccgttctggg
gctcgccgcctgcagaacctgtggagggaccagcgagaagaagaactaggcgagtattac
atgaagaaatatgccaagtcatctgtgggagagacggtgtatggaggatctgatgagctc
tctgatgacatcacccagcagcagctgctcccaggagtcaaggatccaaatctgtggact
gtcaaatgtaagatcggggaggaacgggccacagccatttctttgatgcgcaagttcatt
gcctaccagttcacagacacgcccctacagattaagtcagtagtggcaccagagcatgtg
aagggctacatctatgtggaggcctacaagcagacccatgtgaagcaggccattgagggc
gtgggcaacttgcggcttgggtactggaaccagcagatggtgcccatcaaggagatgaca
gatgtgctcaaagtggtgaaggaggtggccaacctgaaaccaaaatcgtgggtccgcctc
aagcggggcatctataaggatgacatcgcacaggtggattatgtggagcccagccaaaac
accatctctctgaagatgattccacgcattgactatgaccgtatcaaggcccgcatgagc
ttgaaagactggtttgccaaaaggaagaagtttaaacgacctccacagaggctgtttgat
gctgagaagatcaggtccctggggggcgatgttgcctctgatggtgacttcctcatcttc
gaggggaaccgctacagccggaagggctttctgtttaagagctttgccatgtctgctgtg
atcacagagggtgtgaagcccacactctctgagttggagaagtttgaggaccagccagag
ggcattgacctggaggtggtgactgagagcacagggaaggaacgggaacacaacttccaa
cctggggacaatgtggaggtttgtgagggtgagctcatcaacctgcagggcaagattctc
agtgtggacggcaacaaaatcaccatcatgcccaagcacgaggacctaaaggacatgctg
gaattcccagcccaggaacttaggaagtacttcaagatgggggatcatgtgaaggtgatt
gctggccgatttgagggcgacacaggcctaattgtgcgagtagaggaaaactttgtcatc
ctcttctccgacctcaccatgcatgagctgaaagtgctcccccgggacctgcagctctgc
tcggagacagcatcaggtgtggacgttgggggccagcacgaatggggagagctggtgcag
ctggacccccagaccgtgggtgtcattgtgcgactagagcgggagaccttccaggtgcta
aatatgtacgggaaggtggtgactgttaggcaccaagctgtgacccggaagaaggacaac
cgctttgccgtggccctggactcggaacagaacaacatccatgtgaaagacatcgtcaag
gtcattgacggcccccactcaggtcgggagggcgagattcgccatcttttccgtagcttt
gcctttctgcattgtaagaaactggtggagaatgggggcatgtttgtctgcaagacacgt
cacctggtgctggctggaggctcaaagccccgagatgtgaccaacttcaccgtgggcggc
tttgctcctatgagcccccggatcagcagccccatgcaccccagtgctggaggtcagcgt
ggtggctttggtagcccaggtggcagcagcggtggcatgagcaggggccgggggcggaga
gacaatgagctcatcggccagactgtgcgcatctcccaggggccctacaaaggctacatc
ggtgtggtgaaggatgccacggagtccacggcccgagtggagctgcattccacctgccag
accatctctgtagaccgtcagcgtctcaccacagtgggctcacggcgcccgggtggcatg
acctcaacttatgggcggacgcccatgtatggctctcagacacccatgtatggctctggc
tcccgcacacccatgtatggctctcagacacctctccaagatggcagccgtaccccgcat
tatggctcacagacacccctgcatgatggcagccgtactccagcccagagtggggcctgg
gaccccaacaaccctaacacgccatcacgggctgaggaagaatatgagtacgcctttgac
gatgagcccaccccatcaccacaggcctatgggggtactcccaatccccaaacacctggc
tacccagacccctcatccccacaggttaacccacagtacaacccgcagacgccagggaca
ccagccatgtacaacacggaccagttttccccctatgctgctccctctccacaaggctcc
taccagcccagccccagcccccagagctaccaccaggtggcaccaagtccagctggctac
cagaacacccactctccagccagctatcaccccacgccttcacccatggcctatcaggct
agtccaagcccaagccctgttggctacagtccgatgacacctggagccccttcccctggt
ggctacaacccgcacacaccgggctcaggcattgagcaaaactctagtgactgggtaacc
actgacatccaggtgaaggtgcgggatacctacctggatacgcaggtggtggggcagaca
ggtgtcatccgcagtgtcacgggaggcatgtgctccgtgtacctgaaggacagtgagaaa
gttgtcagcatctctagtgagcacctggagcccatcacccccaccaagaacaacaaggta
aaggtgatcttgggtgaggatcgggaagccacaggtgtactgctgagcatcgatggtgag
gatggcatcgtccgcatggaccttgatgaacagctcaaaatcctcaacctccgcttcctg
gggaagctcctggaggcttga
DBGET
integrated database retrieval system
