Sturnira hondurensis: 118988362
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Entry
118988362 CDS
T07222
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
shon
Sturnira hondurensis
Pathway
shon01524
Platinum drug resistance
shon03430
Mismatch repair
shon05200
Pathways in cancer
shon05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118988362 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118988362 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
118988362 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118988362 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shon03400
]
118988362 (MSH6)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118988362 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
118988362
NCBI-ProteinID:
XP_036903732
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MSRQSTLYSFFPKSPAALNNTNKARVKASGEGGADAATGASPSPSGDAAWNEDRPGPGRL
ASSASPPEARDLNGGLQRSTAPAVPSSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGT
FIREKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQR
ADEALNKDKIKRLELAVCDEPSEPEEEEMEVGATYASDKSEEDNEIESEEEVPPKVQGSR
RSSRQIKKRRVISDSESDMGGSDVEFKPDTKEEGSSDEISSGLGDSDSESLHSSVKVAPK
RKRMVTGNGSLKRKSSRKETPPVTKRATSISSETKSALCAFSAPQNSESPAHITGGCDDS
SRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQ
NFDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYK
VARVEQTETPEMMEARCRKMAHICKHDKVVRREICRVITKGTQTYSVLEGDPSENYSKYL
LSLKEKEDDNSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKG
NLSTETKMILKGSLSSSLQEALIPGSQFWDAAKTLRTLLEEGYFTEKLNEDSGVMLPQVL
KGMTSESDSIGLTPGENSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVNA
TRPGAVFSKASQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLC
APLCNPFAINDRLDAIEDLMVVPDKTSELADLLKKLPDLERLLSKIHNVGSPLKSQNHPD
SRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDEFKSKILKQVITLQTKNPE
GRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIKENEQSLLEYLEKQR
SRIGCRTIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLI
NAEERRDVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVI
LLPKEDAPVFLDLKGSRHPCITKTFFGAEFIPNDIVIGCEEEEEENGKAYCVLVTGPNMG
GKSTLMRQAGLLAVLAQMGCYVPAQVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETA
SILTHATAHSLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVEDYSQ
NVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHR
KAREFEKITNSLRLFREVCLASERSTVDAEAVHKLLTMIEEL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcggcgctgaataat
accaacaaggcccgggtcaaggcctcaggtgaaggcggcgctgacgctgccaccggggcc
tccccttctcccagtggggatgcggcctggaatgaggaccggcctgggcccgggcgtttg
gcgagctccgcgtcgccgcccgaggcgagggacctcaacggagggctgcagaggtcaaca
gcgcctgcggtcccttccagcagttcttgtgacttctcaccaggtgatttggtttgggcc
aagatggagggctacccctggtggccttgcctggtttacaaccacccttttgatggaaca
ttcatccgtgagaaagggaagtccgcccgggttcatgtacaattttttgatgacagccca
acaaggggctgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaggaa
gcccagaaaggaggtcatttttatagtgcaaagcctgaaatactcagagcaatgcaacgt
gcagatgaagccttgaataaagacaagattaagaggcttgaattggcagtgtgtgatgag
ccctcagaaccagaggaggaagaaatggaggtaggtgcaacttacgcatcagataagagt
gaagaagacaatgaaattgagagtgaagaggaagtaccacctaaggtgcaaggatctagg
cgaagtagccgccaaattaaaaaacgaagagtcatatcagactctgagagcgacatgggt
ggctctgatgtggaattcaagccagatactaaggaagaaggaagcagtgatgaaataagc
agtggactgggggatagtgacagcgaaagcctgcacagctctgtcaaagttgctccgaag
cggaagagaatggtgactggaaatggttctctcaaaaggaaaagttcaaggaaggaaacg
cccccagtgaccaaacgagcaaccagcatttcatctgaaaccaagagtgctttgtgcgct
ttctctgcccctcaaaattctgagtccccagctcacattaccggaggatgtgatgatagt
agtcgccccactgtctggtatcacgaaactttagaatggcttaaggaggaaaagagaaga
gatgtgcacaggaggcgacccgatcatcccgattttgatgcatctacactctatgtgcct
gaggatttccttaattcctgcactcctgggatgaggaagtggtggcagattaagtctcag
aactttgatcttgtcatcttttataaggtcgggaagttttatgagctgtaccacatggat
gctcttattggagtcaatgaattagggctggtattcatgaaaggcaattgggcccattct
ggtttccctgaaattgcatttggccgatattcagattctctggtccagaagggctacaaa
gtagcacgagtggaacagactgagaccccggaaatgatggaggcaagatgccgaaagatg
gcacatatatgtaagcatgataaagtggtgaggagggagatttgtagggtcattactaag
ggtacacagacatacagtgtgctggaaggtgacccctctgagaactacagcaaatatctt
cttagcctcaaagaaaaagaggatgataattctggccacactcgagtatatggtgtgtgc
tttgttgatgcctcgctaggaaagtttttcataggtcagttttcagatgatcgccactgt
tccaggtttaggactctagtggcacattaccctccagtacaagtcttgtttgagaaagga
aatctctcaacagaaactaagatgattttgaagggttcattatcctcttctcttcaggaa
gctctgataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaa
gaaggatattttacagaaaagttaaatgaggacagtggggtgatgttaccccaggtgctt
aagggtatgacttcagagtctgattctattgggttgacaccaggagagaacagtgaattg
gccctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttatcgatcaggag
cttttatcaatggctaattttgaagaatatattcccttggattcagacacggtcaatgct
acaagacctggtgctgttttttctaaagccagtcaacgaatggtgctagattctgtgaca
ttaaacaacttggagatttttctgaatggaacaaatggttctaccgaaggtactctgcta
gagaagatcgatacctgccatactccttttggtaagcggctcctaaagcaatggctgtgc
gccccactgtgtaacccttttgctatcaatgatcgcctggatgctattgaagatctaatg
gttgtgcctgacaaaacctctgagcttgcagaccttctaaagaagcttccagaccttgag
agactactgagtaaaattcataatgttggttctcccttgaagagccagaaccatccagat
agcagggctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctt
tctgctctggaaggattcaaagtaatgtgtaaaattatagggattatggaagaagtcatt
gatgagtttaagtctaaaatccttaagcaggtcattacactgcagacgaaaaatcctgaa
ggccgttttccagatttaactgtagaactgaatcgttgggatacagcctttgaccatgaa
aaagctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaa
gctcttgctgacataaaagaaaatgagcagagcctcttggaatatttggagaaacagcgc
agtcgaattggctgtaggaccatagtctactggggaattggcaggaaccgttaccagttg
gaaattccagagaatttcatcacccataatttgccagaagaatatgaattgaagtccacc
aagaagggctgtaaacgatactggaccaaaactattgagaagaagctggctaatctgata
aatgctgaagaacggagagatgtatcactgaaggattgcatgcggcgactgttctataac
tttgataaaaattacaagaactggcaggctgctgtagagtgcattgcggtgttagatgtc
ttattgtgcttggctaactacagtagagggggtgatggtcctatgtgtcgtccagtaatt
ctgttaccaaaagaagatgctcctgtcttcttagacctcaaaggatcacgccatccctgc
atcacaaagactttttttggagcagagtttattcccaatgacattgtaataggctgtgaa
gaggaagaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaacatggga
ggcaagtctactcttatgagacaggccggtttattagctgtactggcccagatgggttgt
tatgtacctgcacaagtgtgcaggctcacaccaattgatagagtatttactagacttggt
gcctcagaccgaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgcc
agtatacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggt
actgcaacatttgatgggacagcaatagcaagtgcagttgttaaagaacttgccgagaat
atcaagtgtcgtacattgttttctacccactaccattcgttagttgaagattattctcaa
aatgttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatccc
agccaagagactattaccttcctttataaattcattaagggagcatgtcctaaaagctat
ggctttaatgcagcaaggcttgctaatcttccagaggaagttattcagaagggacacaga
aaagcaagagaatttgagaagataacgaattcactgcggttatttcgggaagtttgcctc
gctagtgaaaggtcaactgtagatgctgaagctgtccataagttgttgactatgattgag
gaattgtag
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integrated database retrieval system
