Sturnira hondurensis: 118988747
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Entry
118988747 CDS
T07222
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
shon
Sturnira hondurensis
Pathway
shon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118988747 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118988747 (CPSF3)
03019 Messenger RNA biogenesis [BR:
shon03019
]
118988747 (CPSF3)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118988747 (CPSF3)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118988747 (CPSF3)
U7-dependent histone pre-mRNA processing factors
118988747 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
118988747
NCBI-ProteinID:
XP_036904584
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSVIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLSYQLQKLTGDVEEL
EIQEKPALKVFKNITVTQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLDLHVYSKRLEIMLQDIFGEDCVSVKDGSALGVTVDGKTANINLETRTAECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgattcctgcggaggagagtgaccagctgctgatccgaccccttggagctggg
caggaagtcggaagatcatgtatcattctggagttcaaaggaagaaagataatgctggac
tgtgggatccaccctggcctggaaggaatggacgctcttccttatattgatttaattgac
ccagctgagattgatctcctcttaattagtcatttccatctggaccactgcggagccctg
ccctggtttctgcagaaaacaagtttcaaaggaagaacgtttatgacccacgccacaaaa
gccatttacaggtggcttctttctgattacgtcaaggtcagtaacatatcagcggacgac
atgctgtacacggagacagatttggaggagagcatggacaagatcgaaaccatcaatttt
catgaagttaaggaagtcgccgggatcaagttttggtgctaccacgcgggccacgtgctt
ggagcagccatgttcatgatcgagattgcgggcgtgaagcttttgtatacaggtgatttc
tcaagacaagaagatagacacttaatggcggctgaaatcccgaacataaaacctgatatt
cttatcatagagtctacctacgggacccatatccatgagaagcgtgaagagcgggaagcg
agattctgcaacacggttcacgacatcgtcaacagagggggcagaggcctcatccccgtc
ttcgcccttggacgggctcaggagctgctcttgattctcgatgagtactggcagaaccac
ccggagctgcacgacatccccatatactatgcgtcatctttggccaagaagtgcatggcc
gtgtaccagacgtacgtaaatgccatgaacgacaaaatccgcaaacagatcaacatcaat
aaccccttcgtgttcaaacacatcagcaacctcaagagcatggaccacttcgacgacatc
ggccccagcgtggtgatggcctccccgggcatgatgcagagcggcttgtccagggagctc
tttgagagctggtgcaccgacaagaggaacggcgtcatcatcgcggggtactgtgtggag
ggcacgcttgccaagcacatcatgtccgagcccgaggagatcaccaccatgtccgggcag
aagctgccgctgaagatgtcagtggactacatctccttctctgcgcacacggactaccag
cagaccagcgagttcatccgcgccctgaagccgccgcacgtgattttagtccatggagag
cagaacgaaatggccaggttaaaagcagccctgattcgagaatacgaagataatgatgaa
gttcacatagaggttcataatcctcggaacacagaagcagtgaccttgaacttcagaggg
gaaaaactggccaaggtcatgggccttttagcagacaaaaaaccagaacagggccagcgg
gtctcaggaatactcgttaaaagaaacttcaattatcacatactttctccttgtgacctc
tctaattataccgacttggccatgagcactgtgaaacagacccaagccatcccgtacacc
ggcccttttaatttgctctcttaccagctgcagaaactgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctttgaaagtgttcaaaaatatcactgtaacacaggagcca
ggaatggtggtgttggaatggttagcaaacccctccaacgacatgtacgctgacacggtg
acaactgtgatcctggaggtgcagtccaacccgaaaatcaggaaaggtgcggtccagaag
gtctctaagaagctcgacctgcacgtgtacagcaagaggctggagatcatgctgcaggac
atatttggagaagactgcgtcagtgtgaaagacggctctgccctcggcgtcacagtggac
gggaagactgctaatataaacttggagactcggacagccgagtgcgaggagggcagtgag
gacgacgagtccctccgggagatggtggagctggccgcacagaggctgtacgaggccctc
acacccgttcactga
DBGET
integrated database retrieval system
