Sturnira hondurensis: 118989511
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Entry
118989511 CDS
T07222
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X1
KO
K16628
collagen type VII alpha
Organism
shon
Sturnira hondurensis
Pathway
shon04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118989511 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
DUF4992
Motif
Other DBs
NCBI-GeneID:
118989511
NCBI-ProteinID:
XP_036905699
LinkDB
All DBs
Position
Unknown
AA seq
2935 aa
AA seq
DB search
MRLRLLVAAFCAGILAGAPPVRAQHRERVSCTRLYAADIVFLLDGSSSIGRSNFREVRGF
LEGLVLPFSGAVSAQGVRFAAVQYSDDPRTEFGLDALGSGEEVVRAIRDLSYKGGNTRTG
AAILHVADRVFLPPLARSGVPKVCILITDGKSQDLVDPAAQKLKGQGVKLFAVGIKNADP
EELKRVASQPTGDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPPDDSISGPRDLVL
SEPGSESLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERREVSVPAGETSIRLQDLQPL
TEYHVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVPGATGYRVTW
RVLHGGAAQQQELGPGQGSVLLRGLEPDTDYEVTVSTLLGRGVGSATSLTARTDPSVEQT
LRPVILGPTSILLSWNSVPEARGYRLEWRRESGVEVPQKVVLPSHVTRHQLDGLQPATEY
RFTLYTLLEGREVATPAAVVPTGPEQPVGPVTDLQATELPGQRVRVSWRPVPGATEYRVT
VRSTQAVERTLVLPGSQTAFDLEDVRAGLSYTVRVSARVGAREGGAATLTVRREPETSLV
VPGLRVVASDATRVRVAWGPVPGASGFRVTWRTDSGPESSQTLSPESTVTDITGLRPGTS
YQVAVSALRGRKEGPPVVIVARTDPLSPVRTVHVTQSSSSSVTIAWNRAPGATRYRISWH
SGHGPEKSRVVPGEAAAAELDGLEPDTEYTVRVWASVDGVEGPPTSVVVRTGPETVGSVS
KLQILNATSDVLRITWVGVPGATAYRLVWGRREGGPTKQQILPGNRDSAEIRGLEGGVSY
SVRVTALVGDREGAPVSIVVTTPPEKPTTLETLHVVQRGEHSLRLQWQPVPGARGFFLRW
RSEGGQEHSRFLGPEVSSYELDGLEPATLYHVWLSVSWPSGEGPPTEVTAYTESPRAPST
ALRVVDTSVDSVTLAWNPVSGASSYVLSWRPRGVPSEEAVGASQTLPGILSSQRVTGLQP
GTSYLFSLAPVQDGVRGPEASVTHSPVCPHGLMDVVFLLHATRDNAHRSEAVKAALGRLV
SALGPLGPQAVQVGLISYSYQPSPLFPLNGSHDLGVILQKIRNIPYVDPSGNNLGQAVVT
AHEYLLAPDAPGRRPQAPGVMVLLVDEPLRGDISNPLRGAQAAGLKVMILGLKGADPAHL
RHLVSGMDPIQIFFAVNDGPSLDQAVSSLATALCQAASSTQPQPQPQPCVVHCPEGQKGE
PGERGPRGQDGPPGPPGLPGRTGAPGPQGPPGSYAAKGDRGRPGTDGDPGSPGLPGIPGP
PGPKGSPGGPGLRGERGERGPQGPKGEPGAPGAVTDGEGPGLPGKKGDPGPPGPPGPRGP
LGDPGPRGSPGPPGIALKGDKGDRGERGPPGPGAGGTAAGEPGLPGLPGSPGPQGPVGPS
GEKGEKGDCEDGAPGLPGQPGTPGERGLRGPPGDIGPKGDRGVPGAVGETGEKGQRGSPG
LAGPQGPPGVAGHPGAEGPEGPPGPTGRRGEKGEPGRPGDPGTGPAGAGVKGEKGDAGPA
GPRGVAGAKGEPGAPGLALPGDPGPKGDPGTRGPIGLTGRAGPPGDSGTPGEKGDPGRPG
PPGPVGPRGRDGEVGEKGADGLPGDPGLPGKAGERGLRGLPGARGPVGEKGDQGDPGEDG
RNGSPGVPGPKGDRGEPGLPGVPGRPVDSGLGAREKGEPGDRGQEGPRGPKGDPGPPGAP
GERGVNGPRGPPGSQGDPGVQGPVGEKGDRGPPGLDGRSGLDGKPGAPGPPGQHGTAGKA
GDPGRDGLPGLRGEQGPPGPTGPPGAPGKAGEDGKPGPSGKHGEPGDPGEDGRKGEKGDS
GAPGRDGHNGPKGDRGAPGSPGLPGPPGLPGQVGPPGQGFPGMPGSPGLKGDRGDSGPKG
EQGLPGERGLRGDPGSVPNVERLLENIGIKTAALREIVATWDGSSLLMPEHWRGPKGDAG
ERGPPGKEGPVGFSGDRGPKGERGDPGPQGPPGLALGERGPPGLPGLAGEPGKPGIPGIP
GSAGGVGESGRPGERGERGEKGERGEQGRDGAPGPPGPPGIPSTTVDVDKLGPGLPEKQG
PPGPKGAKGEPGSDGERGPKGDRGGPGIKGDQGEPGKRGHDGGPGLPGERGVAGPEGKPG
LQGPRGSPGPVGSHGDPGPPGAPGLAGPAGPQGPSGVKGEPGETGPPGRGLPGPTGPVGL
PGPPGSSGLVGPQGAPGLPGQVGETGKPGAPGRDGTNGKDGDRGAPGVPGSPGLPGPVGP
KGEPGPMGAPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRPG
EPGDPGEDGLKGAPGLRGQKGDPGVGVQGPPGPIGPPGPKGDLGPSGPSGAPGIVGFPGQ
PGPRGEMGQPGPSGERGLAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGDRGDPGVGLP
GARGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGERGEKGDPGTAGLKGDKGDSAIVMGP
PGPRGAKGDTGERGLRGADGEKGPRGDFGSPGEKGSKGEPGDKGAAGLLGTRGLTGPKGQ
PGDAGIPGDPGPPGKDGAPGIRGDKGEMGFMGPRGLKGERGLKGACGLDGEKGDKGEAGS
PGRPGLAGRKGDTGEPGAPGQAGAPGKEGLMGPKGDRGFDGQSGHKGDQGEKGDRGPPGI
GGLPGPRGNDGASGPPGPPGSVGPKGSEGLQGQKGERGPSGESVVGAPGAPGIPGERGEQ
GRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSHPLPSYAADTAHSQR
RPVPVLRVSHAEEEDQVPPEDDEYEYSEYSVEDSLDPEAPWDGDDPCSLPLDEGSCTAYT
LRWYHRAVARSTEGCRPFIYGGCGGNANRFGTREACERRCPPHGAQSQGRGALQS
NT seq
8808 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcgactcctggtggctgcattctgcgccgggatcctggcaggggcaccccca
gtgcgggcccagcacagggagagagtgtcctgcacgcgcctttatgccgctgacatcgtg
ttcctgctcgatggctcctcttccatcggccgcagcaacttccgagaagtgcggggtttc
ctcgaggggctggtgctgcccttctcaggagcagtcagtgcgcagggggtgcgctttgct
gcggtgcagtacagcgatgacccccggacagagtttggcctggatgcgctcggctctggg
gaagaagtggtccgtgccatccgtgatctcagctacaaggggggcaacacgcgcacaggg
gctgcgattctccatgtggcagaccgtgtcttcctgcccccgctggcccgatctggtgtc
cccaaggtctgcatcctcatcacggatgggaagtcccaggatctggtggacccagctgcc
cagaagctgaaggggcaaggggtcaagctctttgctgtgggaatcaagaatgcggacccc
gaggagctgaagcgagttgcctcacagccgactggcgatttcttcttcttcgtcaacgac
ttcagcatcctgaggacattgctgcccctcgtttcccggagagtgtgcacgacagctgga
ggcgtgcctgtgaccctgccccccgatgactccatctctggtccacgagacctggtgctg
tctgagccgggcagtgagtccttgagagtccagtggacagcggccagtggccctgtgact
ggctacaaggtccagtacactcccctgacagggctgggacagccactgccaagcgagagg
cgggaggtgagcgtccctgctggtgaaaccagcattcggctgcaggacctccagccactg
accgagtaccacgtaactgtggttgccttgtatgccaacagcatcggggaggccgtgagt
gggacagctcggaccactgccctggaggggccggagctgaccatccagaacaccacagcg
cacagcctcctggtagcctggcggagtgtgccaggggccactggctatcgtgtgacatgg
cgggtcctccatggtggggccgcgcaacagcaggagctgggccctgggcaggggtcagtg
ctgcttcgtggcctggagccggacacagactacgaggtgaccgtgagcaccctgcttggc
cgtggtgtggggtctgccacctccctgactgcccgcactgacccttctgtggagcagacg
ctgcgcccggtcatcctgggccccacttccatccttctctcctggaactctgtgcccgag
gcccgtggctaccggctggagtggcggcgtgagagtggcgtggaggtgcctcagaaggtg
gtgctgccctctcacgtgacccgccaccagctggatggcctgcagccagccactgagtac
cgcttcacactctacaccctgctggagggccgggaggtggccacccctgcggctgtggtc
cccacagggccagagcagcccgtgggcccggtgacagatctacaggccactgagctgcca
gggcagcgggtgcgagtgtcctggagaccagtccctggtgccaccgagtaccgagtcact
gtacgcagcacccaggcggttgagcggaccctggtgcttcctgggagtcagacggccttt
gacttggaggacgtccgggcggggctgagctacaccgtgcgagtgtctgctcgagtgggt
gcccgagagggcggcgccgccaccctcaccgtccgcagggaaccggaaacctcccttgtg
gtcccagggctgcgggtggtggcatcagatgccactcgagtgcgagtggcctggggacct
gttcctggagccagcgggtttcgggtcacctggaggacggacagtggtccagaatccagc
cagacgctgtccccagaatctactgtcacagatatcacagggttgcggcctggaacctcc
taccaggtggctgtgtcggcgcttcgagggagaaaggagggcccccctgtggtcatcgtg
gctcgcacggacccgctgagcccagtgaggacagtccacgtgactcaaagcagcagctcc
tctgtcaccatcgcctggaacagggctcctggtgccaccagatacaggatttcctggcat
tcgggccacggcccagagaaatcccgggtggttcctggggaagccgcagcggctgagctg
gatgggctggagccagacactgagtacacagtgcgtgtgtgggccagtgtggacggtgtc
gaagggccccccacctctgtggtagtgaggaccggccctgagacggtgggcagcgtatca
aagctgcagatcctcaatgctaccagcgacgttctgcggatcacctgggtgggggtccct
ggagccacagcctacagactggtctggggccggagagagggtggccccacaaaacagcag
atactaccaggaaacagagactcagcagaaatacggggcctcgaaggcggagtcagctac
tcagtgcgagtgactgcactggtcggggaccgtgaaggcgcacctgtctccattgtcgtc
accacgccgccggagaagccaaccaccctggagaccctccacgttgtgcagcgaggggag
cactcgctgaggctgcagtggcagccagtgcccggagcacgcggcttctttctgcgttgg
cgatccgagggtggccaggaacattctcggttcctggggcctgaggtcagcagctatgaa
ctggacgggctggagccggcaaccctgtaccatgtgtggctgagtgtctcgtggccttct
ggagaagggccccccacagaagtgactgcgtacactgagtcacctcgtgccccaagcacc
gcactgcgtgtggtagacacttcagttgactcagtgactctggcctggaacccagtgtcc
ggggcgtccagctacgtcctctcctggaggccacgtggagtccccagcgaagaagcggtg
ggggcctcccaaacgcttcccgggatcttgagctcccagcgggtgacagggctgcagccc
ggcacctcctacctcttctccctggcacctgtccaggacggtgtgcgaggccctgaggcc
tctgtcacacacagcccagtgtgtccccacggtctgatggacgtggtgttcctgctgcac
gccacgagggacaacgcacaccggtccgaggctgtgaaggcagccctggggaggctggtg
tctgcccttgggcctcttgggccacaggcagtccaggttggcctcatctcctacagttac
cagccctccccactgttcccgctgaatggctcccatgaccttggcgtcatcctgcagaag
atccgcaacatcccctacgtggaccccagtgggaacaacctgggccaggccgtggtcaca
gctcatgaatacctgttggcaccagatgctcctggacgccgcccgcaggcgccaggggtg
atggttctgctagtggatgagcccttgaggggtgacatctccaaccctctccgaggggcc
caggctgctgggctcaaagtgatgatcctgggcctgaagggagctgacccggcgcacctg
cgtcacctggtgtctggcatggaccctattcagatcttcttcgccgtgaatgatggccca
agcttggaccaggcagtcagtagtctggcaacagccctgtgtcaggccgcttcttccacc
cagccacagccacagccacagccctgcgtggtgcactgtccagagggccagaagggtgaa
cccggagagaggggcccgagaggacaagatgggcctcccggcccccccggcctcccgggc
aggaccggtgctcctggcccgcagggtccccctgggagttacgctgcaaagggcgacagg
ggccgccccgggacggatggggatccaggcagccctggcctccctgggattcctggacca
cctggcccaaagggctccccaggggggcctggcctccgtggagaacggggagagcgagga
cctcaaggcccaaagggggagccgggagcgcctggggcagtcactgacggggagggcccg
ggccttcctggcaagaaaggggaccctggacctccgggccctcctggacctcgtggccca
ctgggggacccaggaccccgtggttccccaggacctcctggaatagctctgaagggtgac
aaaggcgatcgtggggaacggggccccccggggccaggcgctggtggcacagctgcaggg
gaacccgggctgccgggtcttcctggaagccccggtccccaaggcccagttggcccctct
ggggaaaaaggagaaaagggtgactgtgaggatggagcaccaggcctcccaggacagcct
gggaccccgggtgagcggggcctgcggggacctcctggagacattggccccaaaggtgat
cgaggagtgccaggggctgtgggtgagactggagagaagggccaacgcggatcccctggc
ctagcgggaccccaggggccgccgggagtcgctgggcatcctggagcagagggtcctgaa
gggccaccaggacccactggccgccgaggagagaagggggagcctggccgcccaggggac
cctggcacgggacctgctggtgcaggggtcaaaggagagaagggagacgcagggcccgct
gggcccagaggagttgcgggagccaaaggggagccgggtgcacctggcttggctcttcct
ggagaccctggccccaagggagaccctggaacccggggtcccattggcctcactggaaga
gccggaccccctggtgactcggggactcctggagagaagggagaccctgggcggcccggc
cccccaggacctgttggcccccgaggacgagatggtgaagttggagagaaaggtgccgac
ggcctcccgggtgacccaggtttgcctggaaaagctggcgagcgtggccttcgggggtta
cctggagctcggggacctgtgggtgagaagggagaccagggagatcctggagaagatggg
cgaaatggcagccctggagtgcctggacccaagggtgaccgtggggagccaggtctccca
ggagtccctggacggccggtggactcgggacttggagccagagagaagggagagcctggg
gaccgtggacaggagggtcctcgggggcccaagggtgaccccggccctcctggagcccct
ggagagaggggtgtcaacggacctcggggacccccaggctcacagggggacccaggtgtc
caaggcccagtaggagaaaagggcgaccggggcccccctggcctggatggccgcagcggg
ctggatgggaaaccaggagcccctggcccccctgggcagcacggtactgcaggcaaagct
ggggacccaggaagagatgggcttccgggcctccgaggagaacagggacctcctggcccc
actggcccccctggagcaccgggaaaggcaggcgaggatggcaagccaggcccgagtggg
aaacacggagaacccggggaccccggagaagacgggagaaagggagagaagggagattcg
ggcgcccctgggagagatggtcacaatggccccaagggcgatcgtggagcacccggcagc
cctggactcccaggccccccgggcctccccgggcaggtcggccctcctggccagggtttt
cctggcatgccgggaagtccgggcctcaagggtgaccgaggggacagtggacccaaaggc
gaacagggcctccccggagagcgcggcctgagaggagacccggggagtgtgccgaatgtg
gagcggttgctggagaatatcgggatcaagacagctgccttgcgggagatcgtggcgacg
tgggatgggagctccctgctcatgcctgaacactggcgtggccccaagggggacgctggc
gagcggggtcccccaggcaaggaggggcccgtcggcttttccggagaccgagggccaaag
ggagaacgtggagaccccggtcctcaggggccacctggcctggcccttggggagaggggt
ccccctggacttcctggcctcgctggggagcctggaaagcctggtattcctgggatccct
ggctcagctgggggcgtgggagagtcaggaaggccaggagaaaggggagaacggggagag
aagggagaacgcggagaacagggcagagatggcgcccctggaccccccggtcctcccggc
attcccagcaccacggtggatgtggacaagctgggacctggattacctgaaaaacaagga
cccccggggcccaagggcgccaagggggagccaggcagtgacggtgaacgaggccccaaa
ggagacaggggcgggccaggcatcaagggagaccagggagagcctggaaagaggggtcat
gacggcggcccgggtctaccaggagagcgtggtgtggctgggcctgaagggaagccgggt
ctgcaaggtccaagggggagccctggccctgtgggtagccatggagaccctggaccacct
ggtgccccgggtcttgctggccccgcaggaccccagggaccatctggcgtgaagggagag
cctggggagacaggaccaccaggacggggcctgcctggaccaactggacctgtgggactt
cccgggcctcctggttcttcaggtcttgtgggtcctcagggggcaccaggtttgcccgga
caagtgggggagacgggaaagccaggagccccaggtcgtgatggtaccaatggcaaagat
ggagaccgaggagcccctggtgtgccggggtcaccaggtcttcccggccctgtcggacct
aaaggagagcctggacccatgggagcccctggacaggctgtggtcgggccccctggagca
aagggagagaagggagcccctggagcccttgctggagacctggtgggagagccgggagcc
aaaggcgaccgaggactgccagggcctcggggtgagaagggtgaagccggccgtccaggg
gagcctggagaccctggggaagatggccttaaaggggctccaggactcagggggcagaag
ggtgacccaggagttggggtccagggcccccctgggccaattggtcctccaggtccaaag
ggagacttgggcccctctggcccttccggcgctcctggtatcgttggcttccctggccag
ccaggccctcgaggagagatgggtcagccaggccccagcggagaacggggtctggcaggc
cctccagggcgagagggagccccaggtcccttggggccgcctggaccaccagggtcagcg
ggagcgcccggggcctctggactcaaaggagacaggggagaccctggagtagggctgccc
ggggcccgtggagagcgtggggagccaggtgtccggggtgaagatggccaccctggccag
gagggaccccgaggacttgtgggccccccgggcagccggggagagcgtggggagaagggt
gaccctggaacagcaggactaaagggtgacaagggtgactcggctatagttatggggcct
ccagggccacggggtgccaagggggacacgggtgaacgagggctacgaggtgcagacggc
gagaaaggacctcggggagactttgggagccctggagagaagggcagcaagggagagccc
ggtgacaagggtgcggctggattgctggggacccgtggactcacaggaccgaaggggcag
cctggtgatgcagggattcctggtgacccgggacccccaggaaaggacggagcccctggc
atccgaggagacaaaggagagatgggctttatgggtcctcggggcctcaagggtgaacgg
gggctcaagggagcctgtggcctggacggagagaagggagataagggagaagctggctcc
ccgggccgccccggcctggcgggacgcaaaggagatacgggggagcccggcgcgccaggc
caggcaggggccccgggcaaggagggccttatgggtcccaagggcgaccgaggctttgat
ggacagtcaggacacaagggtgaccagggcgagaaaggagatcgggggcccccaggaatc
gggggcctcccaggtcccaggggcaatgatggtgctagtggtccccctgggccacctggc
agtgttggtcccaaaggatctgaaggacttcagggccagaagggtgagcgaggtccctct
ggagagagtgtggtgggtgcccctggcgctcctgggatccctggagagagaggggaacag
gggcggccagggcctgctggcccccggggtgagaagggagaagccgcgctgacagaggat
gacattcggggcttcgtgcgtcaggagatgagtcagcactgtgcctgccagggccagttt
atcgcatctggatcacaccccctccccagttacgctgcggacactgcccacagccagcgc
cgccctgtgcccgtgctccgggtctctcatgctgaggaagaagaccaagtacccccagag
gacgacgagtatgaatactctgagtactcggtggaggactccctggaccctgaggcccct
tgggacggcgatgacccctgctcgcttccactggacgagggctcctgtactgcctacacc
ctgcgctggtaccatcgggctgtagccagaagtacagagggctgtcgccccttcatctac
ggtggctgcggagggaatgccaaccgcttcgggacccgtgaggcctgcgagcgccgctgc
ccgccgcatggtgcccagagccagggcagaggtgctctgcagagctga
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integrated database retrieval system
