Sturnira hondurensis: 118992037
Help
Entry
118992037 CDS
T07222
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118992037 (SCAF8)
03041 Spliceosome [BR:
shon03041
]
118992037 (SCAF8)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118992037 (SCAF8)
Spliceosome [BR:
shon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118992037 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118992037
NCBI-ProteinID:
XP_036909698
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MPQPRLPALPPPSSPCAAGSCRPSGGECSGRRLFRRWARGLRTDNMEAVKIFNSEDCAST
PACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKC
KPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVL
NLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGL
PDPWVSQIANTDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQPSILQALDAGLVVQLQ
ALTAQLTAAAAAANSLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEITTSQLSHVSES
VNNSIFHQIAEQLQQQNLEHIRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQH
FLEPETNLDDSIDIQQQDMDIDEGQEGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKR
RSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSV
CSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSS
GSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQET
VNTEWETVKSSEPVKETAQTTHSPPPVEKETVVTTQAEVFPPPVAVLQIPVAPAVPTVSL
VPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFLPPPVPPPAVPPPAIPPVVPTP
LVQPPLSMTPETVKEVGFGSLVLPGGPVASSLAASTLPAGSVFNPAKQAEPEEKVPHLID
HQISSGESTRSVIPNDIPSGPAILGQPPNMTSNAGILGVQRPNVSSNPEILGVRPSNVSS
SSGIIGVQPPNILNNSGILGIQPPSASSSSGLLGVLPPSIPNNSGLVGVQPPNIPNASGL
LGTQPPAGPQNLPPLNLSSQRMPVMPMLDLRPGLIPQAPGPRFPLLQPGIPPQRGIPPPS
ILDSALHPPPRGPFPPGDIFSQPERPFLVPGRQGIDNITNPEKRIPLGNDNIQQEGDRDY
RFPPIETRESMSRPPPVDVREVVGRPVDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGM
DHLGRRDHFGFNPEKPWGPRDFDEREHRVLPVFAGPKGLHEERGRFRSGNYRFDPRSGPW
NRGFGQEVHRDFDDRRRHWERQRDRDDRDFDFCREINGNRLGRERIPNTWVPPPQARVFD
FFEGATSQRKGDNVPQVNGENAERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTVADI
ESEPVVESTETEGT
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgcggctgccagcgcttcctcctccgtcttcgccttgcgctgctggttcc
tgccgcccgagcggcggggagtgcagtggccgccgcctcttccgccgctgggctcggggc
ctccgcaccgacaacatggaggctgtgaaaatcttcaacagcgaggattgcgcctctact
cctgcttgtacagactgcttttccagcagcatggacacaagaagcatattatattccctg
aatgactacaaaccaccgatttctaaagcaaaaatgacccaaattactaaggcagccatc
aaagctattaagttctataaacatgtggtacagagtgttgagaagtttattcagaagtgt
aaaccagaatacaaggtacctggactttatgttattgactccattgtacgacagtctcga
catcagtttggtcaagaaaaggatgtgtttgcacccagatttagtaataacatcattagc
actttccagaatttatatcgttgccctggggatgacaagagtaaaatagtgagagtatta
aacttatggcagaagaataatgtatttaagagtgagattattcagcctcttttggatatg
gcagcagggattcctccgccggtcgtcaccccggtcctggccagtaccacggccgcgatg
agcaacaccccaggaactcctgtgacacctgttactccagccaacgtggtccagggtttg
cctgatccgtgggtgtcccagatagcaaacacggacacacttacagctgtggctcagatc
ttgcagagtcctcaaggccagcagtttcagcagttaatacagactttacagatacagcag
cagaagcctcagccgtccatcctgcaggccctggatgctgggctcgtcgttcagctgcag
gctctgaccgcacagctcacggctgcagctgcggcagccaacagcctcaatcccttggag
cagggagtgtcttttaacaagaagttgatggatagatttgattttggggaagactctgaa
catagtgaagaacccaaaaaagaaattacaacttctcaactttctcatgtttcagaatct
gtgaacaattccatttttcatcagatagctgagcaactacagcagcaaaaccttgaacat
atcaggcagcagctcttggaacagcaacagcctcaaaaggcaacccctcaggacagtcaa
gagggaacctttgggtcagagcattccgcgtcaccgtcacaagggagcagtcagcagcac
ttccttgaaccggaaacaaatttggatgattccatagacattcaacagcaggacatggac
atagatgaagggcaagagggagtggaagaggaggtctttgagcaagaagcaaagaaagtg
gctgttcgctcgaggtcaaggacacattcacgctctcgttcaagatcaccaagaaaacgg
aggtctcggtcacgatctggttctcgaaagcgtaaacacagaaagcgatcgcgctcgcgc
tcacgagaaagaaagaggaagtcatcgcgctcctactccagcgaaaggagggcccgggag
cgggagaaggagcggcagaagaaggggctgcctccggtcaggtccaagacgctcagcgtc
tgcagcactactctctgggttggtcaggtggacaagaaggccacacagcaggacttaacc
aacctctttgaagagtttggacaaattgaatccattaatatgattcctccccggggctgt
gcttatgtctgcatggttcatcgacaagacgcgtttcgggcgcttcagaaacttagttct
gggtcctataagatcgggtccaaggtcattaagattgcttgggctttaaacaagggtgta
aaaacagaatacaaacaattctgggatgtggatcttggagtgacatacataccatgggaa
aaagtgaaagtggatgacttggaaggttttgcagaaggaggcatgattgaccaggaaact
gtaaatactgagtgggaaactgtgaaaagctcagaacctgttaaagagaccgcccagacg
actcacagcccgcctccggttgagaaggagacagtggtcacgacccaggcagaggttttc
cctccgcctgttgctgtgttacagattccggtagcaccagctgtacctacagttagttta
gtcccaccagcctttcctgtgtccatgcccgttcctcctcccggcttcagtccaatccct
ccacctccttttctgcgagcaagtttcaacccttcacaaccacctcctggtttcctgcca
cctcctgtcccaccacctgctgtcccaccgcctgctattccgccggtggtaccaacacct
ttagtgcagcccccattatccatgactccagaaactgtgaaggaggttggatttggtagc
ctggttttgccaggtggtcctgttgccagcagtcttgctgcctccactctgccggctggg
agtgtttttaatcctgctaaacaagcagagcctgaagagaaagtacctcaccttatagac
catcagatttcttctggtgaaagcaccagatcagtgattccaaatgatattccaagtggc
cctgcgattttaggacagccgccaaatatgacaagcaatgctggaattcttggagttcaa
agaccaaatgtatccagtaatcctgaaattcttggagtccggccatctaatgtttctagt
agttctgggattattggagtccagccaccaaatattctgaataactctggaattttggga
atacagccaccaagtgcttcaagtagttctggacttttgggagtgctaccccccagtatc
cctaacaattctggacttgtaggagtgcagccaccaaatattccaaatgcatctggactt
ttaggaacacagccaccagctgggcctcaaaacttgccccctttaaatctctctagtcaa
aggatgcctgtaatgcccatgttagaccttcgtccaggactaataccacaggcacctgga
ccaagatttccattgctacagcctggaattccaccccagcgaggaatccctcccccatca
atcctggattcagctcttcacccaccaccccgtggtccttttcctccaggagatattttt
agtcagccagaaagaccttttttagttcctggaaggcaaggcatagacaatattactaat
ccagaaaaaaggataccactggggaatgataacattcagcaggaaggagatagagattac
cggtttcctcctatagaaaccagggagagcatgagcagacctcccccggtggacgttagg
gaggtggttggacggcccgtagatccaagagaaggtcctggaagacctcctctggatggt
agggatcattttggaaggcctcctgtcgatattagagaaaaccttgtgaggccaggtatg
gatcatcttggtcgaagagaccactttggctttaatccagagaaaccgtgggggccgaga
gattttgatgagagagagcatcgagttctgcccgtcttcgctggtccaaaaggcttacat
gaggaaagagggcgattccggtctggaaactaccgttttgatcctagaagtggtccttgg
aacagaggatttgggcaagaagtgcacagagattttgatgaccgcagaagacactgggag
aggcagagggatagggatgacagagattttgatttctgcagagaaattaatggaaatcgt
cttggaagagagagaattccgaacacctgggtcccccctcctcaagctcgggtttttgat
ttctttgaaggggccacttctcaacgaaaaggggataatgtgcctcaggtcaatggtgaa
aatgctgagagacatgctcaaccaccacctttaccagtacagaatgatcctgaactttat
gagaaactgacatcttcaagtgaaataaacaaggagaagagtgacacagttgctgatata
gaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
