Sturnira hondurensis: 118995338
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Entry
118995338 CDS
T07222
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118995338
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118995338
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
118995338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
DUF1512
Motif
Other DBs
NCBI-GeneID:
118995338
NCBI-ProteinID:
XP_036914144
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MAAASPTSHGTSSPSNSESESECEHESDAESDSCDDSDTGESWTSFDQSEEEDHLSSEDV
IKEEPASGPLPCEFEIDKEKPSDVEAADESSCDLERSGLTECKKILRKLSLLIWNTLSKS
QMISLLKDFVESEFFLIDGDSLFITCVSNVNFKKGQTLHFFYIVEKFLHDFIQKEAKFII
VFFKDAENLYSDYPELLALRTTLIQHLEYNTDVTIHTEFSNCLTPEWDIFLKECYPYFLI
VTEKGIIPRQTDFLSIFIIHALQKKINIVLSLGIESDALRIYGFYASSCYLHKQFFETNE
ILLQHALHAYVVEYYRKSQEREILLYGHLRLNLGEMQEEVHQALSLLHSLGPEGADVRSV
VCSVSCAVTLKLYTKMVHGAQDPENPATGTEKQNTQDLKKTPTLSEAADLCRMHCLSVIC
LQRLPLFQRAKSRIITSAWDRTLLPFRRMLKYCEFFTLKQLKAKNNWNVNYAGLPDLTDN
SLRKNIAYYYEVEYSKGLTLELGDTLKQSYQTLWNTVLTVSGDGDFGGPMPVRTTSRPFL
THQKMSPRGSNQEIHKLGLIPLKAEIIEDYAGDILSELPFLSRDDPAITALSKKKEFDEL
IHWHTSRPLSDDLERMMCSAKSKNARERREIQKLQCFYHLFGKSMIGSSRSVRVIRGREL
PPPENSSVQKKKKHQKTSAEKIIEENQKRQLAKLEKKEEGRWNNLSDYIEKEIKENPSSG
IKRLEDFIQTCPVKSVKFAAEMVGLDACFKLWVEHCSESEAVSRDINIIINLMKRIHIIH
EKYSELLQNAHRQKIAKYLKYIGFENLAHLLCPQVQKSSAEKDTSKYSVHTGAARFQLTY
MGPYLFREERSDPDPRVRRFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKI
LRESDDGVVVYVAPTKALVNQVAGTVYSLFTKALPKGLTVCGVFTRDYRHDTFNCQVLVT
VPQCLEILLLSPRHHKWVKSIRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATIS
NPEHLTEWLVSIKRYWQHVESTMENSGPSQNALKVAKKQQRKGVGKPSYRVRLVWYKERY
NDLEKYVCSLKDNDFIIEHYHPCAALTVKHLEKYGIPLDLGFSPRESILLYDAMVHVWPE
WTRKQELEPEEFSCFKNKIVIMRTDAKKYEEELKKEMIRWVQLDPSKVNQLLKYLKPQTF
DSAEAKKQRMFPYFVEKLKEMNKLPAIFFLFNIHSVELSASRLLTNLIIKQNTQKGPNSE
REKMNLNKKLWKAVKSQKRNYAVFFNSDSGARIQRIIVLGAEIEEMTKNLKKHYAVTTDC
TYADQTVVDKQTLSKILYRLKGTRKSYKLHNLLRRGIGYHHGLMEYRQRQVVEMLFRLKH
VKVITATSSLALGINMPCKSVVFMEDSVFLDGLHFRQMSGRAGRRGEDLIGNVFFYGIPL
PKIERLLKSNVPKLKGQFPLSISLVLRLMLLVAKAEDKEDAKAKALSVLQHSLVSFKQPK
IKCMLKFYFIYSLQFLIREEYLNQECIPIGYSGLVSHLHYHEPTNFVLVSLLKKGIFHKL
CIPTNINGQKRFSEDVMETLVVVLANLFGRRHLPPCVNKFENKNSRSMVMLGDLPRGFAE
VIEEYNSVIQKNFGSFLLTVSKLADRTKESQLPLSEIDFSGKECEDSELVSHLMPGTESR
TAVSPFACLSNITDQDLFNINVVNDAMLQTIYVDVTKVPFFYMTKYDMNGRKSPLNGYIM
NFYKNRSLSALTWDNWLNMGDAYHLLKDFTLTVQAIRTSLSELCDDEDDNVVLAFKQLSK
AFSQILGKKD
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcatctcctacgtcacatggaacatcaagccctagtaacagtgagagtgag
agtgagtgtgagcatgagagtgatgctgaaagtgacagttgtgatgatagcgacactggg
gagagctggacctcgtttgatcagtctgaagaagaagaccatctaagctcagaagacgta
ataaaagaagagccagcttctgggccattgccgtgcgaatttgaaatcgataaagagaaa
ccttctgatgttgaagctgcagatgagagcagctgtgatttagaaagatcaggattaact
gaatgtaagaaaattctgaggaagctctcattgttgatttggaatactctgtcaaaatct
cagatgattagcttacttaaagactttgttgaatctgaattttttttgattgatggagat
tcactattcatcacttgtgtttcaaatgtgaacttcaagaaaggacaaactcttcacttc
ttctacattgtagaaaaatttctgcatgatttcattcaaaaggaagccaaatttataata
gttttctttaaggatgcagaaaatctatattctgattaccctgaacttctggcccttcgt
accacattgattcaacatttagaatacaatactgatgtcactattcatacagaattttcc
aactgtctgacaccagaatgggacatatttcttaaagaatgttatccatattttctaatt
gtcacagaaaagggaataatacctcgtcaaacagactttttaagcatttttatcattcat
gctcttcagaagaaaatcaatattgtactgtctttaggaatagagtcagatgcccttaga
atttatggattctatgcctcaagttgctatttacataaacagttttttgaaacgaacgag
atactactgcaacatgccttacatgcctacgtagtagagtattaccgaaagtcacaggaa
agagaaatacttctgtatggtcatttgagactaaacttgggagaaatgcaggaagaggtg
catcaagccttgtccttgcttcacagtctgggccctgaaggagccgatgtgagaagtgtc
gtgtgctctgtttcatgtgccgtgaccctgaaactctatacgaaaatggtacatggtgcc
caagaccctgaaaacccagccaccggcacagaaaagcaaaacacacaggacttgaagaaa
acaccaacactaagtgaagctgcagatctttgcagaatgcactgtcttagtgtgatttgc
cttcaacgtttacccctgtttcaaagagctaagagtagaatcattacttctgcttgggac
aggactcttttaccatttcggagaatgttaaaatactgtgaatttttcaccctaaaacaa
ttaaaggctaaaaacaattggaatgtgaattacgctggcctacctgatttaactgataat
agtttgcgcaaaaatattgcttattattatgaagttgaatatagtaaaggactaaccctg
gaactgggtgacacgttgaaacagagctatcagacgctgtggaacacggttttaacagta
tccggggatggcgattttggaggacccatgcccgtgaggacaacgtccaggccatttctt
acacaccagaaaatgtcacctagaggatcaaatcaagaaattcataaattaggactcatt
cctctaaaagcagaaattatagaagattatgctggagatattttgtcagaactacctttt
ctaagcagggatgacccagctattacagctctttctaagaagaaagagtttgatgaactc
atacactggcatacttccaggccactcagcgatgatttggaaaggatgatgtgcagtgct
aaatccaaaaatgccagagaacgaagggaaatacagaaattacagtgtttttatcacctc
tttggaaaatcaatgataggaagtagcagatcagtaagggttataagaggaagagagctg
ccacctccagaaaactcttcagtgcaaaagaaaaaaaaacaccagaagacgagtgcagaa
aaaattattgaggaaaatcaaaagagacagctcgctaaactagagaaaaaagaggaagga
agatggaataacttgtctgactatattgaaaaggaaattaaagaaaatcctagctctgga
ataaaaagactagaggattttatccaaacatgccctgtgaagtctgtaaaatttgctgca
gaaatggtaggattggatgcctgtttcaaattatgggtggaacactgttcagaatcagaa
gcagtatccagagatataaacatcataattaacttgatgaaaaggattcacataattcat
gaaaaatattctgaactattacaaaatgcacatcgacaaaaaatagccaaatatctaaaa
tatattggatttgagaacttggcacacttactatgtcctcaggtgcagaaatcaagtgct
gagaaggatacttctaaatactcagttcacacgggggcagctcggtttcagctaacatac
atgggtccttatttatttcgagaagaaagaagtgatcctgatcccagagtgcgtcgtttc
ataccagacacgtggcagagggaacttcttgatgtcgtggataataatgaatctgctgta
attgttgccccaacttcatcagggaaaacctacgcttcctactactgcatggagaaaatt
ctgagagagagcgatgacggggtggttgtgtatgtggccccaaccaaggctcttgtgaac
caagtggcaggaactgtctacagtttattcaccaaagcactgccaaaagggttaacggtg
tgtggcgtttttacaagagattaccgtcatgacaccttcaattgtcaggtattggtgaca
gtgcctcagtgtttggaaatactcttgctgtcacctcgtcatcataagtgggtgaaaagc
ataagatatgtcatattcgatgaggttcactgtctcggaggagaaattggcgcagaagtc
tgggagcacctcctcgtcatgatccgatgtccctttctggctctctctgctaccatcagt
aatcctgagcatctcaccgaatggttggtgtcaattaaaagatactggcaacatgttgaa
agcacaatggagaattctggtccatcgcaaaatgccttgaaagttgccaagaaacaacaa
agaaaaggagtgggaaagccctcgtacagagtgaggctggtatggtacaaagagcgatac
aatgacctggaaaaatatgtgtgttccctaaaggataatgactttatcattgaacactat
cacccatgtgctgcacttacagtcaagcatttagagaaatatggaatccctttagacctt
ggattttctccacgggaaagcatactgctgtatgatgcaatggtacatgtttggccagaa
tggacaagaaagcaggagttagaacctgaagaattcagctgcttcaagaataaaatagtc
atcatgaggacagatgccaagaaatatgaagaggaactgaaaaaagaaatgattcgttgg
gttcagctggacccaagcaaggtgaatcagttactaaagtaccttaagcctcagactttt
gacagtgcagaagctaaaaagcaaagaatgtttccctattttgtggaaaaacttaaagaa
atgaataagctgcctgcaatattctttttattcaacattcactcagtggaactatcagcc
tcacgacttcttacaaatttgataatcaagcagaatactcagaaaggcccaaattctgaa
agagagaagatgaatttgaacaaaaaactatggaaagcagtaaagtctcaaaaaagaaac
tatgctgtattttttaattcagattcaggtgctaggattcaaagaatcattgtattggga
gctgaaatagaggaaatgacgaaaaaccttaagaagcattatgcagtgaccacagactgt
acttatgcagaccaaacggttgtggataagcagactttatcaaagatcttatacagactg
aaaggaacaagaaaaagctacaaactgcacaatctgttaaggcggggcatcggatatcat
catggtttaatggaatatagacaaagacaagttgtcgagatgcttttcagactgaagcac
gtcaaggtaataacagctacctcctcccttgctttggggattaacatgccatgtaaatct
gttgtttttatggaagattctgtttttttggatggcttgcactttcgacagatgtctggt
cgtgcaggaagacgtggagaagatctgataggaaatgtgttcttctatggcattccatta
cctaagatagaaaggctcttaaagtcgaatgtgcccaaattgaagggtcagtttccttta
agcatttccttggttctcagacttatgctcttagttgccaaagcagaagacaaggaggat
gccaaagcaaaggcattatcagttctccagcattcactggtgtccttcaagcaaccaaag
atcaagtgcatgttaaagttttacttcatatattctttacaattcttgatccgagaggaa
tacttgaatcaagaatgtattcccatcggatattctggccttgtgtcccatttgcactac
catgaacctacaaactttgttttagtaagcttgctgaagaaaggcatatttcataagttg
tgcattccaaccaacataaacggccaaaagagattttctgaagatgtgatggagacctta
gtggtggtgttagcaaatctttttggaagacggcatcttcctccctgtgtgaacaaattt
gaaaataaaaactctcgttcaatggtaatgctaggtgatcttccccggggatttgcggaa
gtgatagaggaatacaacagcgtaatccaaaagaattttggttccttcctcctaacagtc
tctaagttggccgacaggacaaaagaatcccaactacctctctcggaaattgacttttca
ggtaaagaatgtgaagactctgaactggtctctcatttaatgcctggaactgagagcaga
actgctgtctccccatttgcttgcctgtccaacataactgatcaagatttatttaatatt
aatgtggtaaatgatgctatgttacaaacaatttatgtggatgttacaaaagttcctttc
ttttacatgactaagtatgatatgaatggaaggaagtctccactgaatggttatataatg
aatttctataaaaaccgttccctgtcggcactcacttgggataactggttaaatatggga
gatgcttatcatttactcaaggattttacacttactgttcaagccatcagaacttcactg
agtgaattatgtgatgatgaagatgacaatgttgtgttagcatttaaacaactgagtaaa
gcattcagtcaaatcttaggaaaaaaagactga
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integrated database retrieval system
