Sturnira hondurensis: 118995805 Help Entry 118995805         CDS       T07222                                  Symbol SYMPK Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism shon  Sturnira hondurensis Pathway shon03015   mRNA surveillance pathway shon04530   Tight junction Brite KEGG Orthology (KO) [BR:shon00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     118995805 (SYMPK)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     118995805 (SYMPK)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:shon03021]     118995805 (SYMPK)    03019 Messenger RNA biogenesis [BR:shon03019]     118995805 (SYMPK) Transcription machinery [BR:shon03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      118995805 (SYMPK) Messenger RNA biogenesis [BR:shon03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      118995805 (SYMPK)     U7-dependent histone pre-mRNA processing factors      118995805 (SYMPK) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT Motif Other DBs NCBI-GeneID:  118995805 NCBI-ProteinID:  XP_036914787 LinkDB All DBs Position Unknown AA seq 1279 aa AA seqDB search MAGSSGDSVTRRSVASQFFTQEEGLGIDVMTTSERVVDLLNQAALITSDSKITVLKQVQE LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD ENVNVVKRAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILMLDSDNDGVR THAIKFVEAFIVTLSPRMADSEVPRRHEQDISLDRVPRDHPYIQYNVLWEEGKAALEQLL KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQTEIARNMPNSKDARKRPRDDSDSSLKKM KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQSKEEPKEEK VAKPESVLIKRRLSVQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQQARIKILASLVTQFDSG LKAEVLAFILEDVRARLDLAFAWLYQEYSAYLAAGASGALDKYEDCLIRLLSGLQEKPDQ KDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLD LSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA APWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSP ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDM KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNI LSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHV RSFTPHQQAHIPNSIMTILEASGKQEPEAKEPPAGPLEEDDLEPLALAPAPAPRPPQDLI GLRLAQEKALKRQLEEEQKLKPGGLAAPPSSSSSSARPGPPQGAPQPEEAMDFREEGPEC ETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLTSKEERSPQPLAPAGEDTVKTP SPAAAVAEEAGEPETKGNS NT seq 3840 nt NT seq  +upstreamnt  +downstreamnt atggctggcagcagtggggacagcgtcactcgccggagtgtggcgtcacagtttttcaca caagaggaggggctgggcatcgatgtcatgaccacctcagagagagtggtggacctcctg aaccaggcagcgctgatcaccagcgattcgaagatcacggtgctcaaacaggtccaggag ctgatcatcaacaaagaccccacgctgctggacaacttcctggacgagatcatcgccttc caagtagataagtcgattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc aagcgagacattgagttattgctgaaactgattgcgaacctcaacatgctcttgagggac gagaatgtgaatgtggtcaagagggccatcctcaccatgacccagctctacaaggtggcc ctgcagtggatggtgaagtcacgggtcatcagcgagctgcaggaggcctgctgggacatg gtgtctgccatggccggggacatcattctgatgttggactcggacaacgatggtgtccgc acccacgccatcaagttcgtggaggccttcattgtcaccctgtcgccccgcatggctgac tctgaagtgccccggcgccatgagcaggacatcagcctggaccgcgtcccccgcgaccac ccctacatccaatacaacgtgctgtgggaggagggcaaggcggccttggagcagctcctc aagttcatggtgcaccccgccatctcttccatcaacctgacaacagcgctgggctccctg gccaacatcgcccgccagaggcccatgttcatgtccgaggtgattcaagcctacgaaacc ctgcacgccaacttgcccccgacactggccaagtctcaggtgagcagcgttcgcaagaac ctcaagttgcacctgttgagtgtgctgaagcacccggcttccctggagttccaggcccag atcactacgctgctggtggacctgggcacgccgcagaccgagatcgcccgcaacatgccc aacagcaaggacgcccgcaagcggccccgggacgactcagactcctcgctcaagaagatg aagctggagcccaacctgggggaagatgacgaggacaaggacttggagccaggcccgtcg gggacctcaaaggcctcagcccagatctcgggccagtcggacacggacatcacagctgag ttcctgcagcctctgctgacgcccgacaacgtggccaatctggtcctcatcagcatggtg tacctgccggagaccatgcctgcctcctttcaagccatctacaccccggtggagtccgcg ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggccgca ggactggggcccggtgtggagcagaccaagcagtccaaggaggagcccaaggaggagaag gtggcgaagcccgagagcgtcctgatcaagcgacgcctgtcggtccagggccaggccatc tcggtggtgggctccctgagctccatgtccacgctggaggaggaggccccccaggccaag agaaggccagagcccatcatcccggtcacgcagccccggctggcgggtgctggcgggcgc aagaaaatcttccgtctgagcgacgttctgaagcccctgaccgacgcacaggtggaggcc atgaagctgggcgcagtgaagcggatcctgcgggctgagaaggccgtggcctgcagtggg gcagcccagcaggcacgcatcaagatcctggccagcctggtgacgcagttcgactcgggc ctgaaggccgaggtcctggccttcatcctggaggacgtgcgggcccgcctggacctggcc ttcgcctggctctaccaggagtacagcgcctacctggccgccggggcctcaggtgccctg gacaagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagcctgaccag aaggatgggatcttcaccaaggtggtgctggaggcgcctctgatcacggagagcgccctg gaggtgattcgcaagtactgcgaggacgagagtcgtacctacctgggcatgtccactctt cgagacctcatcttcaagcgcccgtcccgccagttccagtacctgcatgtcctgctggac ctcagctcccacgaaaaggacaaggtgcgttcccaggccctgctgttcatcaagcgcatg tacgagaaggagcagctgcgagagtacgtggagaaattcgccctgaactacctgcagctg ctggtccaccccaacccgccgtccgtgctgtttggggccgacaaggacacagaggtggcg gcgccctggaccgacgagacggtgaagcagtgtctgtacctctacctggccctcctgcct cagaaccacaagctgatccacgagctggcagctgtgtacactgaggccatcgcggacatc aagcggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactctcca gagctgctgctcctggtggaaaactgtcccaagggggcagagacgctggtcacgagatgc ctgcacagcctcacagataaagtcccgccctccccggagctggtaaagcgggtccgggat ctgtaccacaagcggctgccagacgtccgcttcctcatccccgtgctcaatgggctggag aagaaagaagtgatccaggccctgcccaagctcatcaaactcaaccccattgtggtgaaa gaggttttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtccccc ctgaaccctggagagcttctgattgcattacacaacatcgactcatccaagtgcgacatg aagtccatcatcaaagccaccaacctatgctttgcggagcggaacgtgtacacatcggag gtgctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatg aggaccgtcatccagtccctgaccatgtacccccgcctcgggggcttcgtcatgaacatc ctgtcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatc aagtgctgccagcgcaccaagccgcagagcttccaggtcatcctgcagctgccgccccag cagctgggcgctgtctttgacaagtgcccagagctccgggagcccctgctggcccatgtc cgctccttcaccccccatcagcaagcacacatccccaactccatcatgaccatcctggag gccagcggcaagcaggagccggaggccaaggagcctcctgcagggcccctggaagaggat gacctggagcccctggcgctggctccggcccccgccccccggccccctcaggacctcatc ggcctacggctggcccaggagaaggccttaaaacggcagctggaagaggaacagaagctg aagcctgggggcctggcagcgcccccctcttcctcctcctcctctgccagaccaggcccc ccgcagggcgcgccccagccggaggaagccatggacttccgggaggaggggcctgagtgt gagacccccgccatcttcatcagcatggacgacgactcggggctgacagaggccgccctg ctggactcgagtcttgaggggcccctgccgaaggaggcagcagcgggcgggctgacgtcg aaggaggagaggagcccccagcccctcgcccctgctggagaagacaccgtgaagaccccc agccccgccgccgccgtcgcggaggaagccggggagcccgagaccaaggggaacagctga

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