Sturnira hondurensis: 118996410
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Entry
118996410 CDS
T07222
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shon04131
]
118996410 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shon04147
]
118996410 (COPA)
Membrane trafficking [BR:
shon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
118996410 (COPA)
Exosome [BR:
shon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118996410 (COPA)
Exosomal proteins of bladder cancer cells
118996410 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
118996410
NCBI-ProteinID:
XP_036915679
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKESFDP
EKERIPDIDLNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GSEGWGEDAELQLDEEGFVEAPEGLGDDALGKGQEEGGGWDVEEDLELPPELDVPPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRFILLSVPLLVVDNKQEISEAQQLITICREYIVGLSMETERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILAACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagactaagagcgcgcgagtcaaagggctcagttttcatcccaaa
agaccctggatcctgaccagtttgcacaatggggtcatccagttatgggactatcggatg
tgcacccttattgacaagtttgatgagcatgatggtccagtccgaggcattgacttccat
aagcagcagccattgttcgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgttgtctgttcacattactagggcacttagactacatacgtaccacattt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgttttaacagggcacaaccattatgtaatgtgt
gctcagttccacccctctgaagacctggttgtatcagccagtctggaccagactgtgcgt
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagtaaactgggctgccttccatcccactatgccccttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaatgaatcaaaggcgtgg
gaggttgatacctgcaggggccattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaaaagcatccgagtctgggatatgtctaag
cgaactggggttcagaccttccgcagggaccatgatcgtttctgggtcctagctgcccac
cctaaccttaacctctttgcagccggccatgatggtggcatgattgtgtttaaactggag
cgggaaaggccagcctatgctgttcatggcaatatgctacattacgttaaggaccgattc
ttacgtcagctggatttcaacagctctaaagatgtagctgtgatgcagttgcgtagtggt
tccaagtttccagtgttcaatatgtcatacaatccagcagaaaatgcagtcctactgtgt
acaagagccagcaatttagagaatagtacctatgatctctacactatccccaaggatgct
gactctcagaatcctgatgctcctgaagggaaacgatcctcgggcctcacagccgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcactcgcttttgatcaagaatctg
aagaatgagatcaccaaaaaagttcaggtgcccaactgtgatgagatcttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacactctttgatgtacagcagaag
cgaactctggcatctgtaaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagccctactggccaaacatgccattgtgatctgtaaccgcaaattggaggct
ctgtgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgaaagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggactacgggatc
attcgaactctggatttacccatctatgtcacaagagtgaaaggcaacaatgtatattgc
ctagatagggagtgtcggcctcgtgtgctcaccattgatcctactgagttcaagttcaag
ctggcccttatcaacagaaaatatgatgaggtactacacatggtaagaaatgccaaacta
gtaggccagtctatcattgcttatctccagaagaaggggtatcctgaagtggcactgcat
tttgtcaaggatgagaaaactcgctttagtttggcactagagtgtggaaacattgagatt
gccctggaagcagccaaagcactggatgacaaaaactgctgggaaaagctgggagaagtg
gcattgctacaggggaaccaccagattgtggaaatgtgctatcagcgtactaaaaacttt
gacaaactttctttcctgtaccttatcactggcaacttagagaaacttcgcaagatgatg
aagattgctgagattcgaaaggacatgagtggccattatcagaatgccctgtacctgggt
gatgtgtcagaacgggtgcggatcctgaagaactgtggacagaagtcactggcctatctc
acagctgctacccatggcttagatgaagaagctgagagcctgaaggagtcatttgatcca
gagaaggagagaattccagacattgaccttaatgccaagttgctccagccacccgcacct
atcatgccattggataccaattggcccttattgactgtgtccaaagggttctttgaaggc
tccattgccagcaaggggaagggaggagcattggctgctgacattgacattgacacggtt
ggtagtgagggatggggagaggatgcagagctgcagctggatgaagaggggtttgtggag
gctcccgaaggtttgggggatgacgctctcgggaagggacaggaagaaggtggtggctgg
gatgtagaagaagatttggagctccctcctgagttggatgtaccccctggggcagctggt
ggggctgaggatgggttctttgtgccccccaccaagggaaccagcccaactcagatctgg
tgcaataactctcagcttccagttgatcacatccttgcaggctcttttgaaaccgccatg
cggcttcttcatgaccaggtaggggtaacccagtttggcccctacaaacaactgttcctg
cagacctatgcccgaggccgtaccacctatcaggctctgccctgtctgccctccatgtat
ggctaccctaatcgcaattggaaggatgcagggctgaagaatggtgtaccagctgtgggc
ctgaagcttaatgacctcatccaacggttgcagctgtgctaccagctcaccacagttggc
aagtttgaggaggctgtggaaaaattccgtttcattttactcagtgtaccactccttgtt
gtggacaataaacaggagatttcagaggctcaacagctcatcaccatttgccgtgagtac
attgtgggtttgtccatggagacagaaaggaagaagctgcccaaagagactctggaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagcctgtgcac
atgatcctggtgctccggacagccctcaatctcttcttcaagcttaagaactttaaaaca
gctgccacctttgctcgtcgcctgttggaactagggcccaagccggaagtggctcagcag
acccgcaaaatcctggctgcctgtgagaagaaccccacagatgcctaccaacttaattat
gacatgcacaacccttttgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtggagaagtgtccactcagtggggcctgctattcccctgaattcaagggtcagatc
tgcagagtcaccacagtgacagagattggcaaagatgtgattggcttaaggatcagtcct
ctgcagtttcgctaa
DBGET
integrated database retrieval system
