Sturnira hondurensis: 118996558
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Entry
118996558 CDS
T07222
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
shon
Sturnira hondurensis
Pathway
shon03022
Basal transcription factors
shon05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118996558 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
118996558 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118996558 (TAF4)
03036 Chromosome and associated proteins [BR:
shon03036
]
118996558 (TAF4)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118996558 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
118996558 (TAF4)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118996558 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
118996558
NCBI-ProteinID:
XP_036915903
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MILGPTMQGPLPTATGLPPPAPGTPTGLPKGSASAVTQSLPRTPSATTSGIRATLTPTVL
APRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQTTMAP
RPATPTSAPPVQISAVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPAAALQRSPGVQPQL
VLGGAAQTASLGTATAVQTGTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSG
KQSTETAANVKELVQHLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPD
SAAFIQQSQQQQPPPPQATTALTAVVLSSSVQRTAGKTAAAVTSALQPPVISLTQPTQVG
AGKQGQPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHNRIVLTTPQQIQLNPLQPV
PVVKPAVLPGTKALSAVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESAR
ILATNSELVGTLTRSCKDETFLLPAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQ
NLVEKISETAQQKNLSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAK
SRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGSGTEG
SGPGSAVPGSSGVGAPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKALLK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgggccaactatgcaagggccgctgcctacggccaccggcctcccgccgcct
gcccccggcactcccaccgggctgcccaagggctcggccagcgcggtcacccagagcctg
cccaggactccctcagccaccaccagcggtattcgggccacgctgacacccacggtcctg
gcccctcgcctgccacagccgcctcagaatccgacaaacatccagaacttccagctgccc
ccaggtatggtcctggtgcggagcgagaacgggcagttgttaatgatccctcagcaggcc
ctggcgcagatgcaggcccaggcgcacgcccaggcccagcctcagaccaccatggcgccc
cgccctgccacccccacaagtgccccgcctgtccagatctccgctgtccaggcccctggg
acaccaattattgcccggcaggtgaccccaacgaccataatcaagcaggtgtctcaggcc
cagacgacggtgcagccagctgctgcgctgcaacggtcgcccggagtgcagcctcagctc
gtgctgggtggcgccgcccagacagcctcccttgggacggcgacggccgtccagacgggg
acgccgcagcggactgtcccgggggccaccacgacctccacggccgccacggaaacgatg
gagaacgtgaagaagtgcaagaacttcctgtccacgctgataaagctcgcctcgtccggg
aagcagtccacagagacggccgccaacgtgaaggagctggtgcagcacctgctggacgga
aaaatcgaagcagaggacttcaccagtcggctctaccgagaactcaattcttcacctcaa
ccttaccttgtgcctttcctgaagaggagcttgcccgccttgagacagctgaccccggac
tccgcggccttcatccagcagagccagcagcagcagccgcccccgccgcaggccaccacc
gcgctcacggctgtggtgctcagcagctccgtccagcgcacggctgggaagacagcggct
gccgtgaccagtgccctccagccccctgtcatcagcctcacgcagcccacacaggttggc
gctggcaagcaggggcagcccacgccgctggtgatccagcagccacccaagcccggagcc
ctgatccggcctccccaggtgacgctgacgcagacaccaatggtggcgctccggcagcct
cacaaccgcatcgtgctgaccacaccccagcagatccagctgaacccgctgcagccagtc
ccagtggtgaagcccgccgtgctgcctggaaccaaagcactgtctgccgtctcggcccag
gcggctgctgcccagaaaaacaagctcaaggagccgggcggcggctcgttccgggacgat
gatgacatcaatgacgtggcttctatggctggagtcaacctgtcagaagaaagtgcaaga
atcttggcgacgaactccgagttggtgggcacactcacgcggtcctgcaaagatgagacc
ttcctcctcccggcgcctttgcagaggaggatcttggagatagggaagaagcacggcatc
acggagctgcaccctgacgtggtgagctacgtgtcacacgccacgcagcagaggctacag
aaccttgtggagaagatatcggagacggctcagcagaagaacctctcttacaaggatgac
gacaggtacgaacaggcaagtgacgtccgggctcagctcaagttttttgagcagcttgat
cagatcgagaagcagaggaaggacgagcaggagagagagatcttaatgcgagcagccaag
tctcggtcccgacaagaggatccggagcagttgaggctgaagcagaaggcgaaagagatg
cagcagcaggagctggcgcagatgaggcagcgggacgccaacctcaccgcgctggccgcc
atcgggccccgcaaaaagcggaaagtggactctccgggtccaggctcggggacagagggc
tcgggccccggctcggcggtcccaggcagctccggtgtgggcgccccccggcagttcaca
cggcaaaggatcacgcgggtcaacctcagggacctcatattctgtctagagaatgagcgt
gagacaagccattcactgctgctctacaaagcgctcctcaagtag
DBGET
integrated database retrieval system
