Sturnira hondurensis: 118996593
Help
Entry
118996593 CDS
T07222
Symbol
HELZ2
Name
(RefSeq) helicase with zinc finger domain 2
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118996593 (HELZ2)
Enzymes [BR:
shon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
118996593 (HELZ2)
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118996593 (HELZ2)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118996593 (HELZ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
RNB
AAA_30
AAA_19
PhoH
ResIII
AAA_22
nSTAND3
UvrD-helicase
DEAD
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
OB_Dis3
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
118996593
NCBI-ProteinID:
XP_036915978
LinkDB
All DBs
Position
Unknown
AA seq
2925 aa
AA seq
DB search
MLHRRARPASEMVSLEPGSLPPSSMATKDPLLAKLYAQLDLCLGCPRCTQRLDESTYLLH
QLEHGCSQEVLLARFKQAPKNRVWRKVGRRPTFPRPARYQVCRYYTRGLGCGRHRNQCTF
ARSHEEALVWTFEREHNVHRLWLKAAVQGGGAQHAPGSPAATILEEFGGRFQLLCCHCFR
HRPPRLCPLDPEGRCPRHGPCPSVLAHVSSEGHRKWQVLEVRPRPQSRRLLAYCLYVEGG
LPCRHGASRCQFAHSAVEMAVWEAERLHGLRRPDLLAPPAPRGRTPEAQLYCSACLVTCH
SQEAFENHCSSPEHMRMVALDQTVVWEHRSPPAGLSTFELCPRPSLCEFGAVCTKAHSEG
ELQEWRRRARMAQQREQAAFQEGLMPYRERLLAEYRSSSEEILVLAETVDGVTVTCHQPL
VHRAQEKKMQHCWTFVVRSEEPLKHVALLKQELGADFSLEAPCLPPGQVYAQGERFCVPD
SPAEFRVGVRVQTASFGTFEQWVVFDFGRRPALLRRLQLQLGQQQRPGATPAPSPHEELE
RWHTGNRHVVPGVERPAEHAALMAKYKVPELALEFHRGGPAPGPLSCSNYRERMHQFLHE
EEAARQQLVAKLNLRCPVSLKMSLETPALGMLFPPLGALYAEVPIPTSLAPDTDQGFLLA
RAVSTALVAPVPAPDNTVFEVQLETRAGSEQVRWLLLPAHCCAALGLHAEASPTLEVQFQ
VDPLTFRLWHEAVDALPEERLVVPDLGACTLPRPRPSLPALHGNRKQRLAVEFIAGGSPG
DVRPVAPLLIYGPFGTGKTYTLAMASLEVIRQPHAKVLICTHTNSAADIYIQEHFHNYVT
SGHPEATPLRVMYTDRPPSQTDAVTLRYCCLTEDRRAFRPPTRAELERHRIVVATTSQAR
ELKVPAGFFSHILLDEAAQMLECEALTPLRYALPGTRVVLAGDHMQVTPRLFSVSRAQAA
GHTLLYRLFQFYQQQTHETAQRSRLIFHENYRSTEAIITFVSRHFYLAKGTPIHARGRVP
RHPRLYPLLFCHVAGDPERDLSLTSWLNTAEVAQVVEQVQQLCDTWPHCWGPLEQRRICV
VSHGAQVSALRQELRRRNLGQVSVGSFEILPGREFRAVVLSTVHSLQSLQSPGVPALEFF
TDPRVLNTIMTRAQSQVVAVGDAVALCSFGACSKLWKSFLRQCAEHRSVFPEDLSLGHIE
QAVAQRQRWASHRRPVAPPAEGARAVVSGDTAPEERAATAPATQPAAEGDAFPASTSVGA
AQEAEAGDTAAGSGSGGCPAVGDVASPGSSASVVAGAAATDSEDTDEPEDSESDFWSLDG
ELNADDSVLQELLDESRKVMVTVREDGLLDTVARPASPQQARQYVNLPPDVLRKLLRVEP
RLHHRCTFVPETFERATAVPLDTPGPGPIQLRGRLHCGMAFSGDEVLVKVIGGDRTPQGR
PQGRVLGVLKRRRHELLFVCRMDEWDPRLMTPIDGAVTKIFVANLKDPLRVPVYRLQKGS
VQRVGYEQLSAQASRRRLFWVRIVVWRERFYYPLGIVLEVLPEATTWEQGLRVLDLEYGL
REPSPDPASVSKALQKYREELSRAPGTRDDCRSFLTFTVDPQGAGNLDDALSVRDLGPRY
EVGVHIADVASFVPRDGALDVEARQQGITIYAPNREPTPILPAGLCHEVLSLLPGQDRFA
ISLFLVFEKGSNRLRSPRFAPSVVRSDCQLSYEEAERVIRGQPGAGLQLPARLDSVDACV
AAACYFARVLRRHRLQAACPYEQLDEDSVLGFRVAHAMVKEYMVQFNSLVAEFLVGSEHT
RTVTPLRWQPTPSSHQLDTVSERHSELVPLSLHLRQHLRGRVPPNTQLHLLASLWRLVQH
AAQAQDADLLVDLLTTDDMHPSLAAVRLDFRKVLGRSAFVRSSQGEQQPAGHYSLQVEWY
TWASSPIRRYLDVVLQRQMLLALGHGGSSYSARDIDRLCQDFSRQHGRAQSFQRRACSLH
LATQLKAQPRQKLGFVVDVEPGARCFRLFFPANPETLPDPCPVFYRCLQLAEHPRALESR
PGLRLQWRRRIYSVLENGPCPPLPGALLDPHTWPVDAALWQKLLALVEEQRWPEAAALVR
EQGAAKAPQRELGKVSRSACKLFVEVARELGSGDTLQVQLSAALHRGILAPALQLWTVAP
GLSLCLEHVERPGDCFSGQAPQAGQDSFSHVEDYCRVWQPFCSLESATSAVGESEAITLQ
QVRVAWDPARTGQGPLHGSFRLDAAFLREHSIDVDFDHCYLCIRLEGLRAAPVAAWDPRP
EASPGQLPRAAPPLGPSSLGPVLSIDPDTYTWVAHGLTENLDLNKDGPADRREFTKQVRF
FVHHMAMEKVPEEVLRPGTAFTIEVLPKQLPDIRKEEAVRELKDASQLVINIALGHPIPL
PRHPSRHPAGQQALRRGIPSRFLELQAFDLPGGHRKLNPSQNTAVREALKKQFTVIQGPP
GTGKTVVGFHIVFWFHKLNEELPPSGSPSCILYCGPSNKSVDVVAGLLLSRKAELKPLRV
YGEQAEATEFPVPGVSSRGLFRKTPREGRPNPTLRSITLHHLIRAPTNPCAQEIKAFDAR
LQRGEIFSEEDLASYKKVLTKARKHELGRHRVVLCTCSCAAAASLKGLNVRQVLVDEAGM
ATEPETLIPLVRFPGAEKVVLLGDHKQLRPVVKNEHMQSLGLDRSLFERYYRDAHMLDTQ
YRMHEDICAFPSMEFYQQKLKTWQGLRRPPSVLGHVDRESCPVIFGHMQGHEQSLLVSTD
EGNENSKANLQEVAEVVRIAKQLTLDGTVDPKDIAILTPYNAQAAEISKCLGQRGVTGLT
VCSITKSQGSEWRYVLVSTVRSCPESDLDLRPTKSWLKRFLGFVVDPNQVNVAITRAQEG
LCIVGDHLLLRCCPLWRRLVDFCEAQGCLVPVGQVRVRRRWAVSS
NT seq
8778 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccgcagggccaggccagcatccgagatggtgtccctggagcccggctctttg
ccccccagctccatggccaccaaagaccccctgctggccaagctgtacgcccagctggac
ctgtgcctgggctgcccccgctgcacccagcgcctggacgagagcacctacctcctgcat
cagctggagcatggctgctcccaggaggtcctgctggcccgcttcaaacaagcccccaag
aacagggtctggcgcaaggtgggccgcaggcccacctttccacggccagcgaggtaccag
gtctgccgctactacacccgtgggctcggctgtgggcggcaccggaaccagtgcaccttt
gcccgaagccatgaggaggcgctggtctggacctttgagcgcgagcacaacgttcaccgg
ctgtggctgaaggccgcggtgcagggcggcggggcccagcatgcgccgggcagcccggcg
gccaccatcctcgaggagtttggtggccgattccagctgctctgctgccactgcttccgg
caccgccccccacgcctctgccccctggaccccgaggggcgctgccccaggcacggcccc
tgcccctcggtcctggcccatgtgagctccgagggccaccgcaagtggcaggtgttggag
gtgcggccacggccccagagccgccggcttctggcctactgcttgtacgtggagggcggg
ctgccgtgccggcacggggcgtcccgctgccagttcgcccacagtgcggtggagatggcc
gtgtgggaggccgagcggctacacgggctgcggcggcccgacctgctggcgcccccggcc
ccccgcggcaggacccctgaggcccagctgtactgcagcgcctgtctggtcacctgccac
tcccaggaggccttcgagaaccactgctcctccccagagcacatgaggatggtggccctg
gaccagaccgtggtctgggagcaccgcagccccccggcggggctctccaccttcgagctc
tgccccaggcccagtctctgcgagttcggggccgtctgcaccaaggcgcattcggaggga
gagctgcaggagtggcggcggcgggcgaggatggcgcagcagcgggagcaggcggccttt
caggaggggctgatgccctaccgcgagaggctgctggccgagtaccggagcagcagcgag
gagatcctggtgctggccgagaccgtcgatggcgtgactgtcacctgccaccagcccctg
gtgcatcgggcccaggagaagaaaatgcagcactgctggacgtttgttgtccgctctgag
gagcccctgaaacacgtggccctgctcaagcaggagctgggagctgacttctcgctggag
gccccctgcctgccgccaggccaggtgtatgcgcagggagagcgtttctgcgtgccggac
agccctgccgagttccgggtgggagtacgagtgcagaccgcctccttcggcaccttcgag
cagtgggtggtgttcgactttggccgcaggccagctctgctgcggaggctgcagctgcag
ctgggccagcagcagcgcccaggggcgaccccggcccccagcccccacgaagagctggag
cgctggcacactggcaaccgccacgtggtccctggcgtggagcgcccggcggagcacgct
gccctcatggccaagtacaaggtgcctgagctggctctggagttccaccgcggcggcccg
gccccggggcccctgtcctgctctaactaccgagagaggatgcaccagtttctccacgag
gaagaggctgctcggcagcagctggtggctaagctgaacctccggtgccctgtgtccctg
aagatgtccctggagacgccagccctgggcatgctcttcccacccctgggagccctctat
gctgaggtccccatccccacctccctggcaccagacacggaccagggcttcctgctggcc
cgggcagtcagcacagcactggtggccccagtgcccgcacctgacaacacggtgttcgag
gtgcagctggagacccgggctggctcggagcaggtgcggtggctgctgctgccggcccac
tgttgtgcagccctgggactacacgccgaggccagtcccacgctggaggtgcagttccag
gtcgacccgctgactttccgcctctggcatgaggcggtggacgcgctgccggaggagcgc
ctggtggtgcctgacctgggggcctgcactctgccccgcccgcggcccagcctgcccgcc
ctgcacggcaaccgcaaacagcggctggctgtcgagttcatcgccggtggcagccccggg
gacgtgcggcctgtcgcccctctgctcatctatggcccctttggcacgggcaagacctac
acactggccatggcctccctggaggtcatccgacagccccatgccaaggtgctcatctgc
acccacaccaacagcgcggctgacatctacatccaggaacacttccacaactacgtgaca
agtggccaccccgaggccacgccgctgcgggtgatgtacaccgaccggccgccgagccag
acggacgccgtcactctgcggtactgctgcctgaccgaggaccgccgggccttccgcccg
cccacgcgtgccgagctggagcgccaccgcatcgtggtggccaccacctctcaggcccgg
gagctcaaggtgcccgccggcttcttctcgcacatcctgcttgacgaggccgcccagatg
ctggagtgtgaggcgctcacccccctgcgctacgccctgcccggcacccgcgtggtgctg
gccggggaccacatgcaggtcacgccccggctcttcagcgtgtcccgggcgcaggcggca
ggccacacgctgctgtaccgcctgttccagttctaccagcagcagacgcacgagaccgcc
cagcgcagccgcctcatcttccacgagaactaccgctccacggaggccatcatcaccttc
gtctcgcggcacttctacctggccaagggcacccccatccacgcccgcggcagggtcccg
cgccacccccggctctacccgctcctgttctgccacgtggcaggtgacccggagcgcgac
ctgtctctgacctcctggctcaacacggccgaggtcgcgcaggtggtcgagcaggtgcag
cagctgtgtgacacctggccccactgctggggccccctggagcagaggcgcatctgcgtc
gtgtcccacggcgcccaggtgagcgcgctgaggcaggagctgaggaggaggaacctgggc
caggtgtccgtgggcagctttgagatcctgccaggccgggagttccgggcggtggtgctg
agcactgtgcacagcctccagagcctgcagagcccgggcgtccccgccctggagttcttc
acggacccccgggtgctcaacaccatcatgacccgcgcccagtcgcaggtggtggccgtg
ggcgacgccgtggccctctgctccttcggggcctgcagcaagctgtggaagagcttcctc
cgccagtgcgcagagcaccgcagcgtcttccccgaggacctgtccctggggcacatcgag
caggccgtggcacagaggcagcgctgggccagccaccggcggccggttgccccaccggcc
gagggagccagggcagtggtgtctggggacactgccccagaggagagggcagccacggcc
cccgccacacagcctgcagccgagggcgatgccttcccagccagcacctcagtgggggcc
gcacaggaggcagaggctggggacacagctgcagggtctgggtcaggagggtgcccagct
gtgggggatgtagcgtccccagggagctcggccagcgtggtggcaggggctgcggccaca
gacagtgaggacaccgacgagcccgaggactccgagtctgacttctggtctttggacggg
gagctcaacgccgacgactcggtcctgcaggagctgttggatgagagccggaaggtgatg
gtgacggtgcgggaggacgggctgctggacacggtggccaggccggcgtccccacagcag
gcccggcagtacgtgaacctgccgccggacgtgctgcggaagctgctgcgcgtggagccc
cggctgcaccacaggtgcaccttcgtgcctgagaccttcgagcgggcgacagctgtgccg
ctggacaccccggggcccggccccatccagctgcggggccgcctgcactgtggcatggcc
ttcagtggggacgaggtgctggtcaaggtcatcggcggcgaccggacccctcaggggcgg
ccgcagggccgagtgctgggcgtgctgaagaggcggcgccacgagctgctgttcgtgtgc
cgcatggacgagtgggacccgcgcctcatgacccccatcgatggcgcggtgaccaagatc
ttcgtggccaatctgaaggacccgctgcgggtgccggtataccgcctccagaagggcagc
gtgcagagggtggggtacgagcagctctcggcccaggccagccgccgccggctcttctgg
gtgcgcatcgtggtctggcgggagcgcttctactacccgctgggcatcgtgctggaggtg
ctgcccgaggccaccacctgggagcagggcctccgcgtcctggacctggagtacggcctc
cgagagccctcgccggacccggcctccgtctccaaggcgctgcagaagtaccgcgaggag
ctcagccgggcgcccggcacccgggacgactgccgcagcttcctgaccttcaccgtggac
cctcagggcgccggcaacctggacgacgccctcagtgtgcgggacctgggccccaggtac
gaggtgggcgtgcacatcgccgacgtggccagcttcgtgcccagggacggggcactggat
gtggaggcccgccaacagggcatcacaatctacgcccccaaccgggagcccacacccatc
ctgccggccggcctctgccacgaggtgctcagcctcctccccggccaggaccgcttcgcc
atctcgctcttcctcgtcttcgagaagggcagcaaccggctcaggagcccccgcttcgcc
ccctccgtggtccgctccgactgccagctgtcctacgaggaggcagagcgggtgatccgg
gggcagcccggggccggcctgcagctgcccgcccgcctggactccgtggacgcctgcgtc
gcggccgcgtgctacttcgcccgggtgctgcgccggcaccgcctgcaggctgcctgtcct
tacgagcagctggacgaggacagcgtgctgggcttccgcgtggcccacgccatggtcaag
gagtacatggtgcagttcaacagcctggtggccgagttcctggtgggcagtgagcacacc
cgcacggtcacgccgttgcggtggcagcccacacccagcagccaccagctggacacggtg
agcgagaggcactcggagttggtgcccctgtcgctccacctgagacagcacctgcgtggc
cgtgtgccccccaacacgcagctgcacctgctggcctccctgtggaggctcgtgcagcac
gcggcccaggcccaggacgccgacctgctggtggacctgctcaccacggatgacatgcac
ccctcgctggctgccgtgcgcctggacttccgcaaggtcctgggccgctccgcctttgtt
cgctccagccagggggagcagcagccggccggccactactcactgcaggtggagtggtac
acctgggccagctcgcctatccgcaggtacctggacgtggtcctgcagcggcagatgctg
ctggccttgggccacgggggctcctcctactccgccagggacatcgacaggctctgccag
gactttagccgccagcacgggcgggcccagagcttccagcgccgggcctgcagcctgcac
ctggccacgcagctcaaggcccagccgcggcagaagctgggcttcgtggtggacgtggag
ccgggggcccgctgcttcaggctgttcttcccagccaacccagagacgctgcctgacccc
tgccccgttttctaccgctgcctgcagctggccgagcacccgagagccctggagagccgg
ccgggcctgcggctccagtggcgacgccgcatctactcggtgctggagaacgggccgtgc
cctcccctgcccggcgccctgctggacccgcacacctggcccgtggacgccgccctgtgg
cagaagctgctggccctggtggaggagcagcggtggcccgaggcggctgcactcgtgcga
gagcagggtgccgccaaggcgccgcagcgggagctggggaaggtgtcccgaagcgcctgc
aagctctttgtggaggtggcccgggagctgggcagtggggacacgctgcaggtgcagctc
agtgcagcgctgcaccgggggatcctggcgcccgccctgcagctgtggactgtggcgccc
ggcctcagcctgtgcctggagcacgtggaacggccgggcgactgcttctcgggccaggcg
ccccaggccgggcaggacagcttcagccacgtggaggactactgccgcgtgtggcagccc
ttctgctccctggagtcggccaccagtgctgtgggcgagagcgaggccatcacgctgcag
caggtgcgcgtggcctgggacccggcacgcacggggcaggggccactccacggcagcttc
cgcctggacgccgccttcctccgcgagcacagcatcgacgtggactttgaccattgctac
ctctgcatccggctcgagggccttcgggctgcgcctgtagccgcctgggacccgcgccca
gaagccagcccgggccagctgccccgggctgccccgccccttgggcccagcagcctgggc
ccggtcctgagcatcgaccctgacacctacacctgggtggcccatgggctgacagagaac
ttggacctaaataaagacggtccggccgaccggcgagagttcaccaagcaggtgcgattc
ttcgtccaccacatggccatggagaaggttccagaagaggtgctgagacccggcaccgcg
ttcaccattgaggtgctgcccaagcagctgcccgacatccgcaaggaagaagccgtgcgt
gagctgaaggatgcgtcccagctggttatcaacatcgccctgggccaccccatccccctg
ccccgccatccttcccgccaccctgctggccagcaggccctccgcagagggatccccagc
aggttcctggagctgcaggccttcgacctgcccggaggccatcgcaaactgaaccccagc
cagaacacagccgtccgagaggctctgaagaaacagttcaccgtcatccagggcccacca
ggcacggggaagacagtggtgggcttccacatcgtgttctggtttcacaagttaaatgag
gagctgccgccctccggcagcccctcctgcatcttatactgtggcccctccaacaagtcg
gtggatgtcgtggcaggcctgctgctgagcaggaaggcggagctgaagcccctccgcgtg
tatggggagcaggcggaggccaccgagttcccggtgcccggtgtgagcagcagaggcctg
ttcaggaagacccctcgggaggggaggcccaacccaaccctcaggagcatcaccctgcac
cacctgatccgggcgcccaccaacccctgcgctcaggagatcaaggctttcgacgctagg
ctgcagagaggggagattttctccgaggaggaccttgcttcgtacaagaaggtcctcacg
aaggcgcggaagcacgagctgggccggcacagggtggtgctgtgcacctgctcctgcgcc
gccgcggccagcctcaagggcctcaacgtccggcaggtcctggtggacgaggcgggcatg
gccacggagcccgagaccctcatccccctggtgaggttcccaggggccgagaaggtggtt
ctcctcggggaccacaagcagctgcggcctgtggtcaagaatgagcacatgcagagcctg
gggctggacaggtctctcttcgagaggtactacagggacgcccacatgctggacacgcag
taccgcatgcacgaggacatctgtgccttcccctccatggagttctaccagcagaagctg
aagacctggcagggcctgcggcgaccgcccagcgtcctgggccacgtggacagggagagc
tgcccggtcatctttggccacatgcagggccacgagcagagcctgctggtgtccacagat
gaagggaacgagaactccaaggccaacctgcaggaggtggcggaggtggttcgcatcgcc
aagcagctgaccctggacgggacagtggaccccaaggacatcgccattctcacgccctac
aatgcacaggccgcggagatcagcaagtgcctggggcagaggggcgtcaccgggctgacc
gtctgctccatcaccaagagccaggggagcgagtggcgctatgtgctggtgagcactgtg
cgctcctgcccggagagtgacctggacctgcggccgacgaagagctggctgaagaggttc
ctgggcttcgtcgtggaccccaaccaggtgaacgtggccatcacccgggcccaggagggg
ctctgcatcgttggagaccacctcctcctgcggtgctgccccctgtggcgccggctcgtg
gacttctgtgaggcccagggctgcctggtgcccgtcggccaggtgcgggtccggaggagg
tgggccgtgtcatcctga
DBGET
integrated database retrieval system
