KEGG   Sturnira hondurensis: 118996903
Entry
118996903         CDS       T07222                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
shon  Sturnira hondurensis
Pathway
shon03420  Nucleotide excision repair
shon04120  Ubiquitin mediated proteolysis
shon05161  Hepatitis B
shon05170  Human immunodeficiency virus 1 infection
shon05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:shon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118996903 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118996903 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    118996903 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    118996903 (DDB1)
   05161 Hepatitis B
    118996903 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shon04121]
    118996903 (DDB1)
   03400 DNA repair and recombination proteins [BR:shon03400]
    118996903 (DDB1)
Ubiquitin system [BR:shon04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     118996903 (DDB1)
DNA repair and recombination proteins [BR:shon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      118996903 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118996903 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 118996903
NCBI-ProteinID: XP_036916410
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSSGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNVETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcggctgaagacttaaacctgctgattgccaaaaacacgagattagag
atctatgtggtcacagccgaggggctccggcctgttaaagaggtgggcatgtacgggaag
atcgctgtcatggagctcttcaggcccaagggggagagcaaggacctcctgtttatcctg
acagctaagtacaatgcctgcatcctggagtataagcagagtggtgagagcattgacatc
ataactcgagcccatggcaatgtgcaggaccgaattggccgcccctctgagactggcatt
attggcatcattgatcccgagtgccggatgattggcctgcgactctatgatggccttttc
aaggtcatcccactagaccgagacaataaagagctcaaggcttttaacatccgcctggag
gagctgcatgtcatcgatgtcaagtttctatatggttgccaagcacctaccatctgtttt
gtctaccaggaccctcaggggcggcacgtgaaaacctatgaggtgtctctccgagagaag
gaattcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatt
gcagtcccagagccttttggaggggccatcatcatcgggcaggagtccatcacctatcac
aacggtgacaagtacctggcgattgcgcctcccatcatcaagcaaagcacaattgtgtgt
cacaatcgtgtggaccccaacggttcccgttacctgctgggagacatggagggacggctc
ttcatgctgcttttggagaaggaggagcagatggacggcaccgtcaccctcaaggatctc
cgggtagaactgctcggagagacctctattgctgagtgcttgacgtacctggacaatggt
gttgtctttgtcgggtctcgccttggtgactcacagctggtgaagctcaatgttgacagc
aacgaacaaggctcctatgttgtggccatggaaacctttacaaatctgggacccattgtg
gacatgtgcgtggtggacctggagaggcaggggcaagggcagctggtcacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggcctgtggccactgcggtctgatcccagccgggag
accgatgacactttggtgctctctttcgtgggccagacgagagttctcatgttgaatgga
gaggaggtggaagaaaccgaactgatgggttttgtggacgatcagcagactttcttctgt
ggcaacgtggctcatcagcagctcatccagatcacttcagcatccgtgaggctggtctcc
caagaacccaaagcccttgtcagcgagtggaaggagccgcagggcaagaacatcagcgtg
gcgtcctgcaacagcagccaggtggtggtggccgtgggaagggccctctactacctgcag
atccaccctcaggagctccgacagatcagccacacagagatggaacacgaggtggcctgc
ttggacatcacaccattaggggacagcagtgggctgtcccctctctgtgccattggcctc
tggacagacatctcggcgcggatcttgaagctgccctcttttgagttgctgcacaaagag
atgctgggtggagagatcattcctcgctccatcctgatgaccacctttgagagcagccac
tacctcctttgtgccttgggggatggggcacttttctacttcgggctcaacgttgagaca
ggcctgttgagcgaccgcaagaaggtgactctgggcacacagcccacggtcttgaggacc
ttccgttctctgtccaccaccaacgtcttcgcttgctccgaccggcccactgtcatctac
agcagcaaccacaagctggtcttctccaatgtcaacctcaaggaggtgaactacatgtgt
ccccttaactcagacggctatcctgacagcctggcactggccaataacagcaccctcacc
attggcaccatcgacgagatccagaagctgcacattcgcaccgtccccctttacgagtct
cccaggaagatctgctatcaggaagtgtcccagtgcttcggggtcctctccagccgtatt
gaagtccaggacacgagcgggggcaccactgccctgaggcccagtgccagcacccaggcc
ctgtcgagcagcgtcagctccagcaagctgttctccagcagtacagccccgcacgagacc
tcctttggggaggaggtggaggtgcacaacctccttatcatcgaccagcataccttcgaa
gtgcttcacgcccaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaag
ttgggcaaagaccccaacacgtacttcatcgtgggcacagccatggtgtacccagaggag
gcggagcccaagcagggtcgtattgtggtgtttcagtattcagatggaaaactacagact
gtggctgaaaaggaagtgaaaggggctgtgtactctatggtggaatttaacgggaagctg
ctggccagcatcaatagcacggtgcggctctatgagtggaccacggagaaggagcttcgc
accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaagggcgacttt
atcctggtgggcgacctcatgcgctctgtgctgctgctcgcctacaagcccatggagggg
aactttgaagagatcgctcgggactttaaccccaactggatgagtgctgtggagatcctg
gatgatgacaatttcctgggggctgagaacgccttcaacttgtttgtgtgtcagaaggac
agtgctgccaccactgacgaggagcggcagcaccttcaggaggtcggcctcttccacctg
ggcgagttcgtcaatgtcttctgccatggctctctggttatgcagaatctgggcgagact
tccacccctacgcagggctcagtgctcttcggcacagtcaacggcatgattgggctggtg
acctcactgtcagagagctggtacaacctcctcctggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgagcactccttctggagatcctttcataccgagcga
aagacagaaccagccaccggcttcatcgatggagacttgattgagagtttcctggacatc
agccggcccaagatgcaggaggttgtggcaaaccttcagtatgacgacggcagtgggatg
aagcgagaggccacggcagacgacctgatcaaggttgtggaagagctgactcggatccat
tag

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