Sturnira hondurensis: 118997278
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Entry
118997278 CDS
T07222
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
shon
Sturnira hondurensis
Pathway
shon04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118997278 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shon00536
]
118997278 (COL23A1)
Glycosaminoglycan binding proteins [BR:
shon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118997278 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118997278
NCBI-ProteinID:
XP_036916774
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MSSGERGGGGDTRKGAPADGGDGGSPATAAAAWAWAVSALCLLLSVGSAAACLLLGAQAT
TLQGRVAALEEERELLRRPGSPAALAAWAEPHLERLLREKLEGLVKLRTVREAPAECVCS
QGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRVRLEL
DPTYTGDRGQDGAAGPPGPPGLPGARGPPGDTGKDGPRGVPGPVGPKGEAGRDGELGPKG
PPGPKGEPGVPGRKGDDGTPSPPGLPGPPGPKGEPGSVGPPGESGMNGAPGPKGEPGQRG
AEGATGLRGPPGFKGEQGDTVVTDYDGKILDALKGPPGPPGPPGIPGAKGELGLPGAPGI
DGEKGPKGQKGDSGEVGPAGPKGEAGEMGLPGLPGAHGPKGQKGEPASDKLPESLAQIIV
EPGPPGPPGPPGPMGLQGAQGPQGLDGAKGEKGEAGERGPSGLPGPAGPLGLIGLPGTKG
EKGRSGEPGEPGLDGFPGPRGEKGDRSERGEKGERGIPGRKGVKGQKGEPGPPGLDQPCP
VGTDGLPIPGCWHQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgggcgagcgtggcggtggcggcgacacgaggaagggcgccccagcggacggt
ggcgacgggggtagcccagccacagcagcggcagcatgggcctgggctgtgagcgcgctg
tgcctgctgctctccgtgggctcagcggccgcctgtctgctcctgggcgcccaggcgacc
acactgcagggccgagtggcggcgctcgaggaggagcgggagctgctgagacgaccgggg
tccccggccgccctggccgcctgggccgagccgcacctggagcgcctgctgcgcgagaag
ttggagggactcgtcaagctccggaccgttcgggaagcgccagctgaatgcgtctgttcc
caggggcccccaggacggcgcggcaagcccggaagaagaggcgatcccggtcctccaggg
caatcaggacgagatggctacccgggaccactgggtctggatggaaagccaggacttccg
ggccccaagggggaaaagggtgcaccaggagacttcggcccccgggtaagactggagctc
gaccccacctacacgggagaccgcgggcaagatggagctgctgggcctcccgggccccct
ggactgcctggggctcggggacctcccggtgacactgggaaagacggccccaggggagta
ccaggccccgtgggtcccaagggagaggctggacgagacggcgagctgggcccaaaggga
cctccggggcccaagggtgagcccggtgttcccggaaggaagggggatgacgggacgcca
agcccgccagggctacctggacctccggggcccaagggcgagccagggagcgtggggccc
ccaggagagagcggcatgaacggggccccggggccgaagggggagccgggccagcgcgga
gccgagggagccacagggctgcggggtcccccgggcttcaagggcgagcagggagacacg
gtggtgactgactatgacggcaagatcttggatgcccttaagggtccccccgggccacca
gggccaccagggatccccggagccaagggtgagctcggattgccaggtgcccccggaatc
gatggagagaagggacccaaaggacaaaaaggagactcaggagaggtggggccagccgga
cccaaaggggaagcaggcgagatgggcctgcctggcctcccgggtgcccacggccccaag
gggcagaagggagaaccagcatctgacaagctaccagagagcctggcccagatcatagtg
gagcccgggccccctggcccccccggccccccaggccctatgggcctgcagggagcccag
ggtccccagggtttggatggagcaaagggagagaagggcgaggcaggggagagaggcccc
agcggcctgcctgggccagcaggcccgctgggccttattgggctgccaggaaccaaagga
gaaaagggcagatccggggagcccggggagccaggactggatggtttccccggaccccga
ggagagaaaggcgaccgcagcgagcgtggagagaagggggagcgaggcatccctggccgg
aaaggagtgaagggccagaagggtgagccaggaccgccaggcctggaccagccatgccct
gtgggcaccgacgggctgcccatccctggctgctggcatcagtga
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