Sturnira hondurensis: 118997561
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Entry
118997561 CDS
T07222
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
shon
Sturnira hondurensis
Pathway
shon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118997561 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shon03032
]
118997561 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
shon03400
]
118997561 (TOPBP1)
DNA replication proteins [BR:
shon03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
118997561 (TOPBP1)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
118997561 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
118997561
NCBI-ProteinID:
XP_036917154
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MSGNDKQPLFVKFLKSSGNSEYFLKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCMRHQQCVPRAEHPVYNMVMCDVTISCTSLEKDK
REEVHEYVQMMGGHVYRDLNMSVTHLIAGEVGSKKYLVAANLRKPILLPSWVKTLWEKSQ
EKKITRYTDVNMEDFKCPIFLGCIICVTGLDGPERKRVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESIYKIEPRLETKTMPDTSTPT
GQNNTGDSRTLSDVSHISNITASCISESMCNSILNSKVDPMLENLENLDVSAFQSPEDLL
DGCRIYLCGFTGRKLDKLRRLVNNGGGVRFNQLNEDVTHVIVGDYDDGLKQFWDKSAHRP
HVVGAKWLLECFSKGYMLPEEPYIHASYRPVEIPLSDQPESKTSLFKRNSSFSKKECASA
EKHEPADEELLSQYVNDNPTVVEAAKSEVGAFNDTTCVQPFNDSTHISMQEEKRSSVSHC
LPDASTITEEGLFSQKSFLVLGFSNENESNIATVIRENAGKIVSLQSRTVADYTVVPLLG
SDIEAAVGEVVTNTWLVTCIDSQTLIDPKSSPLFKPVPVMAGKTPLEDCVISFSQCAGAE
KDSLTFLAELLGASVQEFFVRKANAKKGMLASTHLVLKEPSGSKYEASKKWNLPAVTIAW
LLETARMGKRANESHFLIENSTKKEQSLETEIANGVNLHPDAAEHPAPCLGAHRKTAVTP
LDMNRFQSKAFHAVISQHTRQVPVSPAGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKD
ALAALETPGGPSQKRRKLSTPLSEVIGRNLKLALANSSRDAVALSASPQLKDAQPEMEEA
PKPLHTAVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRQNDTNREYRSV
KERGIHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISAVQDDRLRSSRLPSADGTA
KDDEADHLPVEENDIDNMMTSNKEEATSNENGRNDSKGALTQTLEMRENFQKQLQEIMSA
TSVVKPQGPRTSFGRNGCTSTSSTPESARSTRTGRSRVLEALRQSRQTAPDVNTEPSQNE
QIIWDDPTAREERARLASNLQWPSCPTQYSEPQVDMKKLEDSPLQDPLHDLKIVEHAVHD
PGNVCVTQTPKHPVSEERETPLKDSHLIPTPQAPSIAFPLANPPVAPHPREKIIIQETHE
DLKKQHTFQLSSLNPQERIDYCHLIEKLGGSVIGKQAFDPSCTHIVVGHPLRNEKYLASL
AAGKWVLHRSYLEACRTAGRFVSEEDYEWGSGSILDALTGISVQQRQLARAALRWRKRIQ
QTQEAGVAEGAFSGWKVILHVANPSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDG
NKLKPDDSGVNIAEAIAQNVYCLKTEYIADYLTQETPPRVESYCLPEAVSFLQNNKEPGS
GLSQKRKAPTEKNNTKRPRVY
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaatgacaaacagccactttttgtgaagtttttgaagtcttcaggcaattcc
gaatattttcttaaagctcttgagtcaataaaagaattccaatcagaagaatatcttcag
attattacagaagaggaggcattgaagataaaggagaatgataggtcactctacatctgt
gacccttttagtggtgttgtctttgatcacctcaaaaagcttggctgcagaattgttggt
cctcaagtcgtcatattttgtatgcgccaccagcagtgcgtcccaagggctgagcatcca
gtttataacatggttatgtgtgatgtaactatatcttgtaccagcctagaaaaagacaaa
agggaagaagttcatgaatatgtacaaatgatgggtggacacgtgtacagagaccttaat
atgtcagttacgcaccttattgctggagaagttggtagcaaaaaatatttagttgccgca
aatctaaggaaacctattttgcttccttcttgggtaaaaacactttgggagaagtcacaa
gagaaaaaaataactagatataccgatgtaaacatggaagacttcaaatgtcctattttc
cttggttgcataatctgtgtgactggcttagatggtccagagagaaagagagttcagcag
ctcacagttaagcatggaggccagtacatggggcagttgaaaatgaatgaatgtacacac
ctcatcgtacaggaaccaaaaggtcagaaatatgagtgtgccaagcgatggaatgtacat
tgtgtgaccacacagtggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatacaagatagagcctagactggaaacaaagactatgcctgatacttcaactcctact
ggccagaataacacaggtgatagtcggactctctcagatgtcagccacatttccaacatc
actgcaagttgcataagtgaatcgatgtgtaactccattcttaatagcaaagtggatcct
atgcttgaaaatctagaaaatctggatgtcagtgcatttcagtcacccgaggatttacta
gatggttgtcggatatatctttgtggttttactggcagaaaactagataaactgagaagg
ctcgttaacaatggaggtggagttcgttttaaccagctcaacgaagatgtaactcatgtt
attgtgggagattatgatgatggattgaagcagttttgggataaatcagcccacaggcct
catgtggtgggagcaaaatggctgctggagtgtttcagcaaaggttatatgcttcctgaa
gagccatacatccacgctagttacagaccagtggaaattccactctcagatcagcctgaa
agtaaaacatccctttttaaaaggaatagcagcttctccaagaaagagtgtgcttctgcc
gaaaagcatgagccagctgatgaagagctgctctctcaatatgtgaatgataacccaaca
gtagttgaagctgcgaagtctgaagttggggcctttaatgacactacttgtgttcagccc
ttcaatgattctactcatatttctatgcaagaagaaaagcggtcttctgtcagtcactgc
ctccctgatgcttctacaattacagaagaaggtttatttagccaaaagagtttccttgtt
ttgggttttagtaatgaaaatgaatctaacattgcaactgtcataagagaaaatgctggg
aaaatcgtgtcccttcagagccgaactgttgctgattatactgtggttcctctgctgggc
tctgacatagaagcagcggtgggggaagtcgttacaaatacgtggctggtaacctgtata
gactctcagactttaattgatccaaagtcaagtcctctcttcaagccagtcccagtaatg
gcaggaaagactcctttagaggactgtgttatttcattcagccagtgtgcaggagccgaa
aaagattctttgacattcttagcagagctccttggagcaagtgttcaagaattctttgtc
cgcaaagccaatgcgaagaaaggcatgcttgctagtacacatcttgtattgaaggaacca
agcggttctaaatatgaagcttccaagaagtggaatttaccagcagtcaccatagcttgg
ctgttggagactgctagaatgggaaagagagcaaatgaaagccattttctgattgaaaat
tcaactaaaaaagagcaaagtttagagactgaaatagcaaatggggtgaatctacatcca
gatgctgcagagcatcctgccccgtgcctgggcgcgcacaggaaaacggccgtcacacct
ttagatatgaaccgctttcagagtaaggccttccatgctgtgatatcacagcacacccgg
caggtgccagtctccccggcaggacagccactccagaaggagccctcgttacacctggac
acaccatccaaatttctgtccaaggacaaactcttcaagccttcctttgacgtaaaggat
gcactggcagccttggaaactccaggcggacctagccaaaagagaaggaaactgagtacc
ccactctcagaagtcatcggcagaaacttgaagcttgctttggccaatagctctcgagat
gctgttgctctttctgccagccctcaactgaaggatgctcaaccagagatggaagaagct
ccaaagccacttcacacagcagtggtctgtgtcagtaaaaaactcagtaagaagcagagt
gaactgaatgggattgcagcctctctgggggcagattacaggtggagttttgatgaaaca
gtgactcatttcatctatcaagggcgacagaatgacactaaccgagagtacagatctgtg
aaagaaagaggaatccacattgtttcagagcactggcttttagaatgtgcccaagagtat
aaacaccttcctgagtctctgtatccacatacttataaccccaaaatgagcttggatatc
agcgcagtgcaagatgacagactccgcagtagtcgactgccctcagctgatgggacagca
aaggatgatgaggcagatcatttgcctgtagaagaaaatgatatagataatatgatgacc
agtaacaaagaagaagcaacatcaaatgaaaatggaaggaatgactctaaaggagctctg
acacagaccctggagatgagagagaatttccaaaagcagctgcaggagatcatgtctgca
acgtcagtggtgaaaccccaagggccgaggacctcctttggcagaaatggctgtaccagc
acctcttcaacccctgagagcgctcgctccacccgcactggacgcagtagagtcctggag
gccctgaggcagtctcgtcagacagcacctgatgtcaacacagagccctcccaaaatgaa
cagatcatttgggatgaccctaccgccagagaggagagggcaaggctcgccagcaatctg
cagtggcccagctgtcccacacagtactctgaaccacaggttgacatgaagaaattggag
gattctcctctccaggaccctttacatgatttaaaaattgttgaacacgctgtccatgat
cctggaaatgtgtgtgtgactcaaactccaaaacacccagtctctgaagaacgggaaact
ccattaaaagacagccacctgatccctacaccccaggcccccagcattgccttccccctg
gccaacccacccgtggctccccatccgagagaaaagattataatacaggagactcatgaa
gacctaaaaaaacagcacacatttcagttgtcatctctgaatcctcaagaacgtattgat
tattgtcatctgattgagaaactaggtggctcggtaataggaaagcaggccttcgacccc
agctgcacacacatcgtggtgggacacccgctgcgcaacgagaagtatctggcctccctg
gcggcggggaagtgggtgcttcaccgctcctacctcgaagcttgcaggactgctgggcgc
ttcgtgtctgaagaagactacgagtggggcagcggttccatcctggatgctttgactgga
atcagcgtgcagcaacgacagctagcccgcgcagcactgaggtggaggaagagaatccag
caaacacaggaggcaggcgttgctgagggggcatttagtgggtggaaggttattttacat
gttgctaatccgtcccgagaagcaggattcaaacgtctgcttcagtctggaggagctaag
gtgctgcctggtcattctgtgcctttatttaaagaagccacacacctcttttctgacgga
aataaactgaaacccgatgactcaggagtcaatatagcagaagctattgcccagaatgtg
tactgcttgaaaacagaatacattgcagattaccttacgcaggaaacccctcctcgagta
gaaagttactgtctaccagaagctgtttcatttcttcagaataataaggagcctgggtct
ggattgtcacaaaagagaaaagctcccacagagaaaaataacaccaaacgacctagagtg
tactaa
DBGET
integrated database retrieval system
