Sturnira hondurensis: 118998142
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Entry
118998142 CDS
T07222
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shon03036
]
118998142 (CHD5)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118998142 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
118998142
NCBI-ProteinID:
XP_036917977
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLEGFEDFFPEEPVSLPKKKKPKKLKENR
SKGKRKKKEGSHDELSENEEDLDEKSESEGSDYSPNKRRKKRLKDKKEKKAKRKRKADDE
DANDDGCLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQPPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGKKVAGLKFRFGGIGTKRKKGSSSEEDEREESD
FDSASIHSSSMRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEEEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPEVEPSAPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDSKSEKRKSKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDSLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPITPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGSEGKKLGEVISSDPNTPVPASPAHLLP
TPLGLPDKMEAQLGYMDEKELGTQKPKKPPEIQALPTAPDRVEGEDKHESSDGKERAREE
RLEETEKAQPSPEQLPKEEALPEKEKILDKLELSLAHGRGESSDFRPDDTKVEEKEPIET
QQNGDKEEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQTSSCPV
TSLSCNAHSQLSHAYRASCPTPIGEKSCRLFRSRGHRGTEREPE
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagacggtggccttgagggcttcgaggactttttc
ccggaggagcctgtgagccttcccaagaagaagaagcccaagaagctcaaggagaaccgg
tccaaagggaagcggaagaagaaggagggcagccacgatgagctgtcagagaatgaagag
gacctggacgagaagtcggagagcgagggcagcgactactccccgaacaaaaggaggaag
aagagactcaaggacaagaaggagaagaaggccaagcggaaaaggaaggctgatgacgag
gatgccaacgacgacggatgcctcaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggacgacgtggactacctattctcggaggccgactaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccgcttattgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgtcctgggagccaagtggcgggagttcagtgccaacaacccc
ttcaagggcagctcggcggcggcagctgcggcggcagtggctgcggctgtggagacggtc
accattgcccctccgctggctgtcagtccccagcagcccccccagcctgtgcccatccgc
aaggccaagaccaaagagggcaaggggcctggagtgaggaagaagatcaaaggttccaag
gatgccaagaaaaagggcaaggggaaaaaggtggcggggctcaagttccgcttcggaggg
atcggcaccaagaggaagaagggctcctcgagcgaggaggacgagcgggaggagtcggac
ttcgacagcgccagcatccacagctcctccatgcgctccgagtgctccgcagccctgggc
aagaagagcaagaggcggcgcaagaagaagaggatcgatgatggcgacggctatgagacg
gaccaccaggactactgcgaggtgtgccagcagggtggcgagatcatcctgtgtgacacc
tgtccgagggcctaccacctggtctgcctcgacccagagctggagaaggcccctgagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagcctaaggaggacgag
gaggaggaggaggagggaggctgcgaggaggaggaggacgaccacatggagttctgccga
gtgtgcaaggacggtggcgagctgctctgctgcgacgcctgcccctcctcctaccacttg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagcggatcctacactggaggtggacggagcct
cctgcccccttcatggtggggctgccaggccccgaagtggagcccagcgcccccccaccc
aagcctctggagggcatcccagagagagagttcttcgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctgcagctggagttgtaccacacggtcatgtaccgc
aactaccaaagaaagaacgacatggacgagccaccgcccttcgactacggctctggcgac
gaggacagcaagagcgagaagaggaagagcaaggaccctctctacgccaagatggaggag
cgcttctaccgctacggcatcaagcctgagtggatgatgatccaccgcatcctgaaccac
agctttgacaaaaagggtgacgtgcactacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggagatcgatgacatcgacatcccctactatgacagcctgaagcaggcc
tactggggccacagggagctgatgctgggagaggacgccaggctgcccaagcggctggtc
aagaagggcaagaagctgaaggacgacaagcaggagaagccgccagacacccccattgtg
gatcccacggtcaagttcgacaaacagccatggtacatcgactccacgggcggcacgctg
cacccgtaccagctggagggccttaactggctgcgcttctcctgggcccagggcactgac
accatcctggccgatgagatgggactgggcaagacagtgcagaccatcgttttcctctac
tccctgtacaaggagggccattccaaggggccctacctggtcagtgcgcccctgtccacc
atcatcaactgggaacgtgagttcgagatgtgggcgcccgatttctacgtggtcacctac
acgggggacaaggagagtcgctccgtgatccgggagaatgagttctccttcgaggacaat
gccatccggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatcaagttccac
gtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctggtggtggatgaggcccaccggctcaagaacaaccagtccaagttcttc
agggtcttgaacagctacaagattgattacaagctgctgctaacggggaccccgcttcag
aacaacctggaggagctgttccacctgctcaacttcctgaccccagagcggttcaacaac
ctggagggcttcctggaggagtttgcggacatttctaaagaagaccagatcaagaagctg
catgacctgttggggccgcacatgctgaggcggctcaaggctgatgtgttcaagaacatg
ccggccaagacggagctgattgtccgtgtggagctgagtcagatgcagaagaagtactac
aagttcatcctcacccgcaacttcgaggcgctgaactccaaggggggcgggaaccaggta
tcgctgctcaacatcatgatggacctgaagaaatgctgcaaccacccctacctcttccct
gtggccgctgtggaggcccccgtcctccccaatggctcctatgatggcagctccctggtc
aagtcttcagggaagctcatgctgctgcagaagatgctcaagaaactccgggatgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtatgagggttacaagtacgagcggattgatggcggcatcacggggggcctccggcaa
gaggcgatcgacagattcaatgcccccggggcccagcagttttgtttcctcctgtccacc
cgggcggggggcctgggcatcaacctggccacagcagacacggtcatcatctacgactcg
gactggaacccacacaatgacatccaggccttcagccgtgcccaccgcatcgggcagaac
aagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcggcccggcctgggctccaag
tcgggctccatgaccaagcaggagctggacgacatcctcaagttcggcacagaggagctc
ttcaaggacgacgtcgagggcatgatgtctcagggccagaggcccatcacacccatccct
gatgtccagtcctccaaagggggcgccctggctgccagcgccaagaaaaagcatggcagt
accccgccaggggacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccggaaccaggacgccacggacgacacggagctgcagaac
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgggaggaggacggc
gtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggacccagactactgg
gagaagctgctgcggcaccactatgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaatgacacgtcccaggaggaccaggag
tggcaggatgaactctcggacaaccagtctgaatactccatcggctccgaggacgaggac
gaggactttgaggagaggccggaggggcagagcggtcggcgtcagtccaggaggcagctg
aagagtgacagggacaagcccctgccgccccttctcgcccgcgtcggaggcaacattgag
gtgctgggcttcaatgcccgacagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcggggaaagagt
gagaaggagtttagagcctatgtgtccctcttcatgcgccacctgtgtgagccgggggct
gacggcgcggagaccttcgcggacggtgtgccccgagagggcctctcgaggcagcacgtg
ctcacgcgcatcggcgtcatgtcgctggttaggaagaaggttcaggagtttgagcacgtc
aacggcaagtacagtaccccggacttgatccccgaggggtccgagggcaagaagctgggc
gaggtcatctcctcggaccccaacacgcccgtgcctgccagccctgctcacctcctgccc
accccgctgggcctgccagacaaaatggaagcccagctgggctacatggatgagaaggag
ctggggacacagaagccgaagaagcctccagaaatccaggccctgccaacggccccggac
agagtggagggtgaggacaagcatgagagctcagatggcaaggagagggcccgagaggag
cgactggaggagacagagaaggcccagccctccccggagcagctgccaaaagaagaggct
ctccccgagaaggagaagattctggacaagctggagctgagcctggcgcacggcagaggg
gagagcagcgatttcaggccagacgacaccaaagttgaggagaaggagcccattgaaaca
cagcaaaatggggacaaagaggaagatgaggaggggaagaaagaagacaagaatggaaag
ttcaaattcatgttcaacattgcagatgggggcttcacagagctacacacgctgtggcag
aatgaggagcgtgcagctgtgtcctcggggaaaatctacgacatctggcaccggcgccac
gactactggctgctggcgggcatcgtgacgcacggctacgcacgctggcaggacattcag
aacgacccgaggtacatgatcctcaacgagcccttcaagtctgagatccacaagggcaac
tacttggagatgaagaacaagtttctggcccgcaggttcaagctgctggagcaggcgctg
gtcattgaggagcagctccggagggccgcgtacctcaacatgacccaggaccccaaccac
ccagccatggctctcaatgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtccctggctgggaacaagcctgccaacgctgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggcagatgtgacccgcctgccctcc
atgctgtcccgcatccccccggtggccgcccgcctgcagatgtccgagcgcagcatcctg
agccggctgacgaaccgagctggcgatcccaccatccagcagacatctagctgccccgtg
acttccctctcttgcaatgctcattcccagctgagccacgcctaccgggccagctgcccg
acccccataggagagaaaagctgccgcctttttaggagccgtggtcaccgtgggacagaa
agggaaccagagtga
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integrated database retrieval system
