Sturnira hondurensis: 118998393
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Entry
118998393 CDS
T07222
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shon03009
]
118998393 (IGHMBP2)
03012 Translation factors [BR:
shon03012
]
118998393 (IGHMBP2)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118998393 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
118998393 (IGHMBP2)
Ribosome biogenesis [BR:
shon03009
]
Eukaryotic type
Other ribosome biogenesis factors
118998393 (IGHMBP2)
Translation factors [BR:
shon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118998393 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
AAA_16
ResIII
nSTAND3
AAA_22
DEAD
Flavi_DEAD
SLFN-g3_helicase
AAA_25
PhoH
Helicase_RecD
IstB_IS21
AAA
UvrD-helicase
VWA_2
AAA_33
UvrD_C_2
ATPase
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-GeneID:
118998393
NCBI-ProteinID:
XP_036918462
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MASATVESFVAKQLDLLELEREAEVEERRAWQEGISLKELQSRGVCLLKLQLSSQRTGLY
GQLLVTLEPRRCASAGLLPSSSLSSGDIVGLYGEDGQLATGVLTKITQKSATVAFDQSCD
FQLSLDHESSYRLLKLANDVTYKRLKTALTALRKHRASHASSLIEVLFGDAAPSPASDIQ
VPAFYNASLDASQQEAVLFALSQRELAIIHGPPGTGKTTTVVEIVLQAVNRGLKVLCCAP
SNVAVDNLVEALARCRRRVLRLGHPARLLESVQQHCLDAALARGDGAQIVADIRRDIDQV
LVKMRKTQDKREKSNFRNEVKLLRKELKEREEAAVLESLRSADVILATNTGASSDGPLKL
LPDDYFDVVVIDECAQALEASCWVPLLKARKCVLAGDHKQLPPTVVSPKAALAGLSLSLM
ERLTGQCGRGVLRTLTVQYRMHQAIMQWASEALYEGQLTAHPSVAECLLRDLPGVVATEE
TGLPLLLVDTAGCGLSELEQEDEQSRGNPGEVRLVSLHVQALVDAGVRASDIAVITPYNL
QVDLLRQSLSHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGDVGFLAEDRRINVAVTR
ARRHVAVICDSRTVGNHAFLKTLVDYFASHGEVRTAFEYLDDIVPENYAHENSQGQAGTQ
PQGSATAAGKPGSRWPEGVRGARVAARPAQKTGCGKPLGSEAHSQPSLNGGGPERVEGRD
GADRFRAVIAEFVASERVQLEFPAFLNSHDRMRIHQIAEEYGLRHGSTGEGKSRYITVSK
RAPPSSPATPATPATPATGATPVSPPLAGADSQAPLQPEPPSPVRAEPPAREPSGPDLRA
VNLERLQREGARQEQQVKERPQAAGSEPRKFPGKKKRKDAKGPTALGLPAVEDFDALISA
AVRADNACGFTKCTASVMTLGQLCSHCGHRYCLSHCLPEIHGCGERARAHARQRISREGV
LHTGSGTKDRSLDPAKRAQLQRRLDKKLNELTGQRKSKRKEEK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcgactgtggagagcttcgtggccaagcagttggacctgctggagctcgaa
agggaagcggaggtcgaggagcgcagggcctggcaggagggcatctccctgaaagaactc
cagagccgaggcgtctgtctgctgaagctgcagctgtccagccagcggaccgggctgtac
gggcagctcctggtgaccttggagccccggaggtgcgcgtctgccggcctgcttcccagc
agcagcctttcttcaggcgacattgtgggtctgtatggtgaggacggtcagctggccact
ggcgtcctgacaaagatcacccagaaatcggccacggtggcctttgaccagtcctgtgat
ttccagctgagcttggaccacgagagttcctaccgactgttgaaacttgccaatgatgtc
acctacaagcgactgaaaacagcgctgactgccttaaggaagcatcgggccagccacgcg
tcctcgctcatcgaggtcctcttcggcgacgctgcccccagtcccgccagcgacattcag
gtgccagccttctacaacgcctccctggacgcctcccagcaggaggcggtcttgttcgcg
ctgtcccagagggaactcgccatcatccatgggcctcctggcactgggaagaccaccacc
gtggtggagatcgtcctccaggccgtgaatcggggcctcaaggtcctgtgctgcgcgccc
tccaacgtcgccgtggacaacctggtggaggctttggctcggtgcaggcggcgggtgctg
cgcctcgggcacccggcccggctcctggagtccgtccagcagcactgtctcgacgcggca
ctagcgcgtggcgacggcgcccagatcgtggcggacatccggcgggacatcgaccaggtc
ttggtgaaaatgagaaagacccaggataagagagagaaaagcaattttcgaaacgaagtc
aagctgctgaggaaggagctgaaggagcgggaagaggccgccgtgctggagagcctgcgg
tcggcggacgtgatcctggcgacaaacacaggtgcatcttccgacggccccctgaagctg
ctgcctgacgactacttcgatgtggtggtcatcgacgagtgtgcccaggccctggaggcc
agctgctgggtgcccctgctgaaggcccgcaagtgcgtccttgccggggaccacaagcag
ctgccccccaccgtcgtctctcccaaggccgcgctggcagggctgtctctcagcctgatg
gagcgcctgaccgggcagtgtggcaggggcgtgctgcggaccctgacggtgcagtaccgc
atgcaccaggccatcatgcagtgggcctccgaggccctgtacgaggggcagctcacggca
cacccgtccgtggcggagtgcctcctgcgggacctcccgggagtggtggccaccgaggag
acgggcctgccactgctgctcgtagacacggccggctgcgggctgtctgagctggagcag
gaggacgagcagtctcggggcaaccctggagaggtgcgcctggtcagtctgcacgtccag
gccctggtggatgctggcgtccgggcgagtgacatcgcggtcatcacgccgtataacctg
caggtggacctgctccggcagagcctctcacacaggcacccagagctggaaatcaagtcc
gtcgatggcttccaaggccgtgagaaggaggccgtggtcctgtctttcgtcaggtccaac
cggaagggtgacgttggtttccttgctgaggaccggaggatcaatgtcgccgtcacccgt
gctcggcgccacgtggcggtcatctgcgattctcgcaccgtcggcaaccacgccttcctg
aagaccctggtggattattttgcctcgcacggggaggtgcgcaccgccttcgagtacctt
gacgacatcgtccctgaaaactatgcccacgagaattcccagggccaggcaggcacacag
ccccaaggctctgccacggccgccgggaagcctggaagcaggtggcccgagggagttcgg
ggggccagagtggctgccaggccggcccagaagacggggtgcgggaagcctttgggctcc
gaggcccactcccagcccagcctcaacggaggtggccccgagcgggtggagggcagagac
ggcgcagaccgcttcagggctgtgatagccgagttcgtggcaagcgagcgagtgcagtta
gagtttcctgccttcctgaactcacacgacaggatgcgcatccaccagatagcggaggag
tacgggctgaggcatggcagcaccggggaggggaagagcaggtacatcaccgtgagcaag
agagccccaccgtcctcgccggccacgccggccacaccagccacgcctgccactggggcc
acgccagtttccccacctctggctggggctgacagccaagcccctctccaacctgagccc
cccagcccggtgcgggcggagccccccgccagagagccgagcggcccagacctgagggcc
gtgaacctggagagactgcagagggagggggcccggcaggagcagcaggtcaaggagcgg
ccacaggctgcgggctcagagccacgcaagttcccaggaaagaaaaagagaaaagatgcc
aaaggacccacggccctcggtctgcccgccgtggaggactttgatgccctgatctctgct
gccgtgagggctgacaatgcctgtggcttcaccaagtgcacggccagtgtcatgaccctg
ggccagctctgctcacactgcggccaccgctactgcctcagccactgcctgcctgagatc
cacggctgtggggagcgggctcgcgcccatgcccggcagagaatcagccgggagggggtc
ctgcacaccggcagcgggaccaaggaccggtccctggacccagccaagagggcgcagctc
cagcggaggctggacaagaagctgaacgagctgaccggccagaggaagagcaaacggaag
gaggagaagtga
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