Sturnira hondurensis: 118999638
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Entry
118999638 CDS
T07222
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
shon
Sturnira hondurensis
Pathway
shon03030
DNA replication
shon03410
Base excision repair
shon03420
Nucleotide excision repair
shon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118999638 (RFC1)
03410 Base excision repair
118999638 (RFC1)
03420 Nucleotide excision repair
118999638 (RFC1)
03430 Mismatch repair
118999638 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shon03032
]
118999638 (RFC1)
03400 DNA repair and recombination proteins [BR:
shon03400
]
118999638 (RFC1)
DNA replication proteins [BR:
shon03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118999638 (RFC1)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118999638 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
AAA_14
AAA_7
RuvB_N
AAA_17
AAA_16
AAA_30
AAA_18
Zeta_toxin
AAA_33
AAA_5
nSTAND3
NTPase_1
NPHP3_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
118999638
NCBI-ProteinID:
XP_036920218
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MAAARPRSARSRCPRRTSRLGPPPEGSCAPLTSSPSAADSTSFHFVGEVVGASGSPSPVT
DSPARRPARPRFNPRAAMDIRKFFGVIPSGKKSASETVKKNEKTKSAEEALKAKKGIKEL
KVNNSCKEDDFKQKQSNKKKRIIYDSESEPEETVQEKNAKKQPEKLPLSPKPDKILRQHP
VTYISETDEEDDFTCKKAASKSKENGRSTNSYLGASTVKKNEENTKTKNKPLSPIKLSPT
SVLDYFGTGSVRRSDKKMVASKRKEPSQNTNDSRLNDEAIAKQLQLDEDSELERQLHEDE
EFAKTLAMLDEEPKKKKVLKDPEERETFSSVQSNLSKAEKHKDPYKVKTEQFLNEKKNYS
PKKQTKCKNSKEFQQHSKSSPHKLGETSPKASSKLALLKKKEESSSKETEPTATKRKESA
IELKETRSPKKMKSSPTKKESVSPEDSEKRRANYQAYRSYLNREGPKALGSKEIPKGAEN
CLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKRDKAAAL
GTKIIDEDGLLDLIRTMPGKKSKYEIAVEAEMNKEKSKLQRTPSKNDQGKRKISPTKNES
ESKKCRLTPRKDGSVKSVREDTGVFQRGLDFKEQVAEQTSGDSRARQVADGSGENKVADL
LWVDKYKPTSLKAIIGQQGDQSCANKLLRWLQNWHKSPSEDQRHAAKSGKFAGKDDGSSF
KAALLSGPPGVGKTTTASLVLQELGYSYVELNASDTRSKNSLKEIVAESLSNTSIKGFYS
SGAAPSGSARHALIMDEVDGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLV
HHCFDLRFQRPRVEQIKAAMLSVAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQ
SKALTYDQAKADSHRAKKDVKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLF
VQENYVHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSQQNWSLLPTQAIYASVL
PGELMRGSLGQFPSFPSWLGKHSSTGKHDRLAQDLALHMSLRTYSSKRTVNMDYLSHIRD
ALVRPLTSHGVEGIQDVVALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDSKVKAAFTR
AYNKEAHLTPYSLQAVKASRHSAGPALDSEYNEELHEDDSQSDEKDQDSTETDAMIKKKT
KSSKPSKSEKDESRKRKGRSSKK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcccgcccgcgttcagcgcggtcccggtgtccacgtcgcacttcccgcctc
gggcccccgccggagggaagctgcgcccctctgacgtcatcgcccagcgccgctgactcc
acctccttccacttcgtcggagaagttgttggcgcgagtggatccccatccccggtaacg
gattccccagcccgccggcctgcgcgcccgcgctttaaccctcgggctgcgatggatatt
cggaaattctttggggttataccaagtggaaagaaatccgcgagtgagacagtaaagaag
aatgaaaaaacaaagtctgctgaagaagctttaaaagcaaagaaaggaataaaggaactc
aaggtaaataattcttgtaaagaggatgactttaaacagaagcaatcaaacaagaaaaag
aggatcatctatgattcagaatcagaaccagaggagacagtgcaggaaaaaaatgccaaa
aagcaaccagaaaaactgccattgtctcccaaacctgataaaattctacgacagcatcct
gtcacttacatttcagaaacagatgaagaagatgactttacgtgtaagaaggcagcctct
aagtcaaaagagaatgggcggtctacaaatagttatcttggagcatcaaccgtgaaaaag
aacgaagaaaacactaagaccaagaataagcctttatcaccaataaaacttagccccacg
tcggtgctcgattattttggaactggaagtgtccgaagatcagacaagaagatggtggca
agcaagcgaaaagagccatcacaaaatacaaatgattccagattaaatgatgaagccatt
gccaagcagttgcaacttgatgaagattcagagctggagagacaactgcatgaagatgaa
gagtttgccaaaacattggccatgctggatgaagaacctaagaagaagaaggttctaaag
gacccagaagagagagaaacattttcatctgtccagtccaatttaagtaaagcagaaaaa
cataaagatccttataaagtaaaaacagaacaatttctgaatgaaaaaaagaactacagt
cctaagaagcaaactaaatgtaaaaattcaaaagaatttcagcaacattccaagtcatca
cctcacaaattaggagaaacttctcctaaagctagttccaagctggcacttttgaaaaaa
aaggaggagagttcttctaaagaaacagaacctacggccacaaaaagaaaagaaagtgcc
attgaattgaaagagacaagaagtcctaagaaaatgaaaagttctcccactaaaaaagag
tctgtaagccctgaagattctgaaaagagacgcgctaattatcaagcttatcgaagttac
ttaaatcgagaaggtcccaaagctctaggctccaaggagatcccaaagggagctgaaaat
tgcttggaaggcctgacgtttgtaatcacaggagtgctggagtccattgaacgagacgaa
gccaagtctctgattgaacgctatggaggaaaagtgaccggaaatgtcagcaagaaaaca
aactaccttgtcatgggtcgtgatagcggacagtccaagcgggataaggcagcagccttg
gggacaaaaattattgacgaagatggcctattggatctcattcgaactatgccaggcaag
aagtccaaatatgaaatagcagttgaagctgagatgaataaagaaaagtccaaattgcag
agaacaccctcgaaaaatgaccaaggaaaaagaaaaattagtccaactaagaatgaatca
gaatccaaaaagtgcagactgactcccagaaaggatggctctgtgaagtcagtgagagag
gacacaggtgtgtttcagagaggcctggacttcaaggagcaggtggccgagcagacaagt
ggtgacagccgggccaggcaggtggctgatggcagcggggaaaacaaagtggcagatttg
ctctgggtggacaaatacaagccaacctcgctcaaggccataattggacagcaaggtgac
cagagctgcgccaacaaactcctacgctggctccagaattggcacaagagcccgtccgag
gaccagagacacgcagcgaagtctggtaaatttgctggcaaagacgacggctccagtttt
aaagcagcgctgctctcaggccccccaggtgttggcaaaaccaccactgcttccctggtt
cttcaggaattgggatacagctacgtggaactgaatgcaagtgatactcggagtaagaac
agtttgaaggagattgttgctgagtcactgagcaataccagcatcaaaggcttttattca
agcggagcagccccttcgggaagcgcgagacacgccctcatcatggacgaggtggacggc
atggcgggcactgaggacaggggaggcattcaggaattaattggtctgataaaacataca
aaaattcccattatttgcatgtgcaatgacagaaatcatcccaagattcgctctttggtt
catcattgttttgatcttcgttttcaaagacctcgggttgaacagattaaggctgctatg
ttgtctgttgcatttaaagagggtttgaagattcccccaccagctatgaatgaaataatt
ttgggagccaatcaagatatcagacaggtcttacacaacctgagcatgtggtgtgcacag
agtaaggccctgacctacgaccaggccaaggccgattcccacagagccaagaaggatgtc
aaactgggcccatttgatgttgcccggaaagtgttcgcagctggagaggagactgctcac
atgtcactcatggacaaatcagatctcttttttcacgattattcgatagcgccccttttt
gtccaggagaactacgtacacgtgaagcccgtcgctgcagggggggacatgaaaaagcac
ctgatgcttttgagcagagcggcagatagcatttgtgatggcgacctggtggaccggcag
atccggagtcagcagaactggagccttttgcccacacaggccatttacgccagcgttctg
cccggagagttgatgaggggctccctgggccagtttccctccttccccagctggctgggt
aagcactcgtccacaggcaagcacgaccgcctcgctcaggaccttgcgttgcacatgagc
ctccgaacttactccagcaaaagaactgtaaatatggattatctgtcacatataagggat
gcacttgtacggcccttgacctcacacggggtagaaggaatacaggatgttgttgccctt
atggatgcatattatttgatgaaagaagactttgagaatatcatggaaattagcagctgg
ggaggcaagcctagtcccttctccaagctggattccaaggtgaaagcagcctttacaaga
gcttacaataaggaagcccacctgactccgtactcacttcaggcagtgaaggcatccaga
cacagcgcaggcccggcactggattccgaatacaatgaagagttacatgaagacgactct
cagtctgatgagaaagatcaagactcgacggagaccgatgctatgatcaagaaaaagaca
aaatcttcaaagccttcaaaatcagaaaaagatgagtccagaaaacgaaaaggaagaagt
tcaaagaaatga
DBGET
integrated database retrieval system
