Sturnira hondurensis: 119000169
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Entry
119000169 CDS
T07222
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119000169 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
119000169 (CDC40)
Spliceosome [BR:
shon03041
]
Complex C
Other components
Step II factors
119000169 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119000169
NCBI-ProteinID:
XP_036920931
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MSAAIASLAASYGSGSGSESDSDSEGGRCPLPTADSLMHLTKSPSDKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNQVTTKYIGSVEEAEKNQGLTVFETGQKKIEKRKKF
KENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKLEEEKPGEEKTIL
HVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSG
HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDT
ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV
NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTK
LYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcttctctggctgcttcctatggttcgggttcggggtccgaatct
gactcggacagtgagggcggacggtgtccgctgccgaccgctgactccctcatgcacttg
actaaatcgccttctgacaagccatctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcccacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctagaaatatgctctctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac
ccttcattagataatcaagtgactactaagtatattggttctgtagaagaagctgagaaa
aatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaaaaggaaaaagttc
aaagaaaatgatgcatctaatattgatggtttcctgggaccatgggcaaaatatgtggat
gaaaaagatgtagccaaaccctccgaagaagaacaaaaagaattggatgaaatcacagca
aagaggcagaagaaaggcaaactggaagaagagaaacctggggaggaaaagacaatctta
catgttaaagaaatgtatgactaccaaggcaggtcttacctgcacatacctcaggacgtt
ggtgttaatctgaggtcaactgtgccacctgagaaatgttatcttcctaaaaaacaaatt
cacgtgtggtctggacacacaaagggcgtcagtgccgtcaggttgttccccctctctggc
catttattgctgtcttgttcaatggactgtaaaattaagctgtgggaggtttatggagac
aggcgttgtctgcgaacatttattggtcatagtaaagctgtcagggacatctgctttaat
actgcaggaacgcagttcctcagcgcagcttacgacaggtatcttaagctctgggacaca
gagacaggacagtgtatatcaagattcacaaaccgaaaagtaccctattgtgtcaaattt
aatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataaaaagattgtg
cagtgggacattcgaagtggagaaattgtgcaggaatatgatcggcacctgggagctgtc
aacaccattgtttttgttgatgaaaacaggagatttgtgagcacatctgatgataagagc
ctaagagtttgggaatgggatatccctgtggatttcaagtatatagcagaacccagtatg
cactcgatgcctgcagtgactttgtctccaaatgggaaatggctagcatgccaatcaatg
gacaaccaaatcttaatttttggagcacaaaacaggtttagattaaataagaaaaaaatt
tttaagggccatatggtagcaggctatgcttgtcaggtggacttttcaccagacatgagc
tatgtgatttcaggagatggaaatggaaaattaaacatctgggactggaagaccacaaaa
ctctatagtcggtttaaagctcatgacaaagtgtgcataggtgcagtgtggcaccctcat
gaaacgtctaaagtcataacatgcggttgggatggtctcattaaattatgggattaa
DBGET
integrated database retrieval system
