Sturnira hondurensis: 119001326
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Entry
119001326 CDS
T07222
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
shon
Sturnira hondurensis
Pathway
shon01524
Platinum drug resistance
shon03430
Mismatch repair
shon05200
Pathways in cancer
shon05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119001326 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119001326 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
119001326 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119001326 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shon03400
]
119001326 (MSH2)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119001326 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
119001326
NCBI-ProteinID:
XP_036922576
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVLPKETLQLDSAAEFGFVRFFQSMPEKPTTTVRLFDRGDFYTVHREDALLAAREVFKT
QGVIKYMGPAGAKTLESVVLSKMNFESFVKDLLLVQQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDTSDSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGEIAGDMGKLRQVIQRGGILITERKRTDFSTRDVYQD
LNRLLKGKKEEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQYELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGTQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLARKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQSLLLAVFVTPFIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSILISTARDLGLESGKQIKLDSNSQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSALTSLNEEYTKNKTEYEEAQNAIVKEIINISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKE
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETAAILRSATQDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTTEDTLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIREPQEEDEMEPAAKRCYLEREQGEKIIEEFLSKVKQIPFAEMS
GENITKKLKQLKAEVVAKNNGFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgccgaaggagacgctgcagctggatagcgcggccgagtttggcttcgtg
cgcttcttccagagcatgccggagaagccgaccaccacggtgcgcctgttcgaccggggc
gacttctacacggtgcaccgcgaggatgcgctgctggctgcccgggaggtgttcaagacc
cagggcgtgatcaagtatatggggccggcgggagcaaagactctggagagtgttgtgctt
agtaaaatgaactttgagtcttttgtaaaagatcttcttctagttcagcagtatagagtt
gaagtttataagaacaaagctggaaataaggcttccaaggagaatgattggtatttggca
tttaaggcttctcctggtaatctttctcagtttgaagacattctctttgggaacaatgac
acatcagattccattggcgttgtgggcgttaaaatgtccacagttgatggccaaagacag
gtcggcgttgggtacgttgactccatacagaggaagctaggactgtgcgagttccccgat
aatgatcagttctccaatctggaggccctcctgattcagattggaccgaaggaatgtgtt
ttgccaggaggagagatagctggagacatggggaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagaactgacttttctacaagagatgtttatcaggac
cttaaccggttgttaaaaggcaaaaaggaggaacaggtgaatagcgctgtcttgccagaa
atggagaatcaggttgcagtttcatcattgtctgcagttatcaagtttttagaactctta
tcagatgattcaaactttggacagtatgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagacacc
actggcacccagtctctggctgctttgctgaataagtgcaaaacccctcaaggacaaaga
ttggttaaccagtggattaagcagcctctcatggacaagaacagaatagaggagagatta
aatttagtggaagcttttgtagaagatgcagaattgagacagagtctacaagaagatttg
cttcgtcgattcccagatcttaaccgccttgccaggaaattccagagacaagcagcaaac
ttacaagattgttaccgactctatcagggcataaatcaactccctaatgttatacaggct
ctggaaaaatatgaaggaaaacatcagtcattgttgttggcagtttttgtaactcctttt
attgatcttcgttccgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtcaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgatttagagaaaaagatgcagtcgatattaataagtacagct
agagatctaggtttggagtctggcaaacagataaaattggattccaactcacagtttgga
tattattttcgcgtgacatgtaaggaggaaaaagtccttcgtaacaataagaacttcagt
accgtagatatccagaagaatggtgttaaatttaccaatagtgctttgacttctcttaat
gaagaatataccaaaaataaaactgaatacgaggaagcccagaatgccattgttaaagaa
atcatcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgttgtcagctttgcccatgtgtcaaatggagcacctgttccgtatgta
cgaccagtcattttggagaaaggacaaggaagaattattttgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcccaatgatgttcactttgaaaaagag
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcgc
caaactggggtgattgttctcatggcgcagattggctgtttcgtgccctgtgagtcggca
gaagtgtccatcgtggactgtatcttggctcgggtcggggctggtgacagccagttgaaa
ggagtctccaccttcatggctgaaatgttagaaactgctgctattctcaggtctgcaacc
caagattctttaataatcatagatgagttgggaagaggaacctctacctacgacggattt
gggttagcatgggctatatcagagtacattgctacaaaaattggtgctttctgcatgttt
gccacccattttcatgaacttactgccttggccagtcagattccaactgttaataatctc
catgtcacggcactgactactgaagataccttaactatgctttatcaggtgaaaaaaggt
gtctgtgatcagagtttcgggattcacgttgctgagcttgctaattttcccaggcatgta
atagaatgtgctaaacagaaagccctggagctagaggagttccagaatatcagagaacca
caagaagaggatgaaatggagccagcagcgaagaggtgctatctggaaagagagcaaggt
gaaaaaattattgaagagtttttatccaaggtgaagcaaataccctttgctgaaatgtcg
ggagaaaacatcacaaagaagttaaaacagctgaaagcagaggtggtggcgaagaataat
gggtttgtaaatgaaatcatttcacgaataaaggttactacgtga
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