KEGG   Sturnira hondurensis: 119001958
Entry
119001958         CDS       T07222                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
shon  Sturnira hondurensis
Pathway
shon03013  Nucleocytoplasmic transport
shon04150  mTOR signaling pathway
shon05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:shon00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119001958 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    119001958 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    119001958 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shon03019]
    119001958 (SEH1L)
   04131 Membrane trafficking [BR:shon04131]
    119001958 (SEH1L)
Messenger RNA biogenesis [BR:shon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     119001958 (SEH1L)
Membrane trafficking [BR:shon04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    119001958 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_EIPR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 119001958
NCBI-ProteinID: XP_036923501
LinkDB
Position
Unknown
AA seq 360 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDSVHDTAFAPNLGRSYHILAI
ATKDVRIFTLKPVRKELMSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNTNPSLGSNISHLPNSLNGSSAGRKHS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtttgtggcacgcagcattgcggcggaccacaaggacctcatccatgatgtttctttc
gacttccacgggcggcggatggcgacctgctccagcgaccagagtgtcaaggtctgggat
aagagtgaaagtggtgattggcattgtactgctagctggaagacacatagtggatctgtg
tggcgtgtgacatgggcccatcctgaatttggacaggttttagcttcctgttcttttgac
cgaacagctgctgtatgggaagaaatagtaggagaatcaaatgataaactgcgaggacag
agtcattgggttaaaaggacaactctagtggacagcagaacatctgttactgatgtgaaa
tttgctcctaagcatatgggtcttatgttagcaacctgttcagcagatggtatagtaaga
atatatgaggcaccagatgtcatgaatctcagtcagtggtctctgcagcatgagatctca
tgtaagctaagctgtagttgtatttcttggaacccttcaagctctcgtgctcattctccc
atgatagctgtaggaagtgatgacagtagtccaaatgcaatggccaaagttcagattttc
gaatataatgaaaacaccaggaaatatgcaaaagctgaaacgctcatgacagttactgat
tctgtccatgatactgcatttgctccaaacttgggaagatcttaccacattctagccata
gcaaccaaagatgtaagaatttttacactaaagcctgtgaggaaagaacttatgtcttct
ggtgggccaacaaaatttgaaattcatatagtggctcagtttgataatcataattcccag
gtatggcgagtgagttggaatataacaggaacagtactagcatcttcaggcgatgatggc
tgtgtaaggttatggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagccccgtcaatgggagttctcagcagggaaatacaaatccttccctaggt
tcaaatatctcacatcttccaaattcattaaatggatcctctgctggcagaaaacacagc
tga

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