KEGG   Sturnira hondurensis: 119003235
Entry
119003235         CDS       T07222                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
shon  Sturnira hondurensis
Pathway
shon03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:shon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119003235 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shon03021]
    119003235 (TAF5L)
   03036 Chromosome and associated proteins [BR:shon03036]
    119003235 (TAF5L)
Transcription machinery [BR:shon03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119003235 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     119003235 (TAF5L)
Chromosome and associated proteins [BR:shon03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     119003235 (TAF5L)
    STAGA complex
     119003235 (TAF5L)
    TFTC complex
     119003235 (TAF5L)
    SAGA complex
     119003235 (TAF5L)
    SLIK complex
     119003235 (TAF5L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N Beta-prop_IP5PC_F eIF2A PROPPIN Ge1_WD40 WD_LRWD1 Nbas_N Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 119003235
NCBI-ProteinID: XP_036925383
LinkDB
Position
Unknown
AA seq 623 aa
MVVVGGWMRDRPPLVTGQIWRESSGCWRTPTCKVMKRVRTEQIQMAVSCYLKRRQYVDSD
GPLKQGLRLSQTAEEMAANLTVQTESGCTNIVSAAPCQTEPQQYEVQFGRLRSFLTDSDS
QHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTI
QDILSNFKLRAFLDHKYVVRLQEDSYNYLIRYLQSDNNAALCKVLTLHIHLDVQPAKRTD
YQLYASGSSSRSEGNGLEPPDMPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYN
TEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDD
EDDAAGTEMKALRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYP
VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST
DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL
RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSAAADGSSGELVGVYTGQMSNV
LSVQFMACNLLLVTGITQENQEH
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggtggtggtgggcggatggatgcgagatcgacctccgctggtgacagggcagatctgg
agggagagtagcggttgctggaggacgccgacctgcaaggtcatgaaacgagtgcgcacc
gagcagattcagatggcagtgtcctgctacctcaaacgccggcaatacgtggactcggac
ggtcccctgaagcaaggactgcggctgtcacagactgctgaggagatggcagccaacctg
acagtccaaaccgaatctggctgcaccaacatagtgtctgcagccccctgtcagacggag
ccccagcagtacgaggtgcagttcggacggctgcggagtttcctcaccgattctgactcc
cagcatagccacgaagtgatgcctctcctctaccctctctttgtctacctccatctcaac
ctggtccagaacagtccgaagagcacagtagaaagcttttacagtcgcttccacggaatg
tttctgcagaacgctagccagaaggatgtcatcgagcagctccagaccactcaaaccatc
caggacatcctgtccaacttcaagcttcgagcattcctagatcataagtacgtggtccgt
ctccaggaagacagctacaactaccttatccgctacctccaaagcgacaacaacgccgcc
ctgtgcaaagtcctcaccttgcacatccatctggacgtgcagcctgccaagagaacggat
taccaactctacgccagcggcagctcctcacgaagtgagggcaatggcttagagccccct
gacatgcccgccccgattctgcagaacgaggctgccctggaggtcttgcaggagagcatc
aagcgagtcaaggatggccccccctccctcaccaccatctgcttctatgccttctataac
acagagcagctgttgaacactgcggaaatctccccagacagcaagctgctggctgctggg
tttgacaactcctgcataaaactgtggagtttacgatccaagaagttaaaatcagaaccc
catcaagtagacgtgtcccgcatccacctggcttgtgatatcctggaagaggaggatgac
gaggatgacgccgccggcaccgagatgaaggccctgcgggggcactgtgggccggtgtac
agcacaaggttcctcgcggacagctcagggttgctctcctgctccgaagacatgtccatt
cggtactgggacctcgggagcttcaccaacactgtgttgtaccaaggacacgcctacccc
gtgtgggacttggacatcagcccgtacagcctgtacttcgccagtgggtcccacgaccgc
acagcaaggctgtggtcgttcgatcggacgtacccgctgagaatatacgcaggccacctg
gccgacgtggactgtgtcaaattccaccctaattccaactacttggctacgggctcgacc
gacaagactgtccggctgtggagtgcccagcagggcaactcggtgaggctcttcacgggc
caccgcggcccggtgctctctcttgccttttcgcccaacggtaagtacttggcgtcggcc
ggtgaggaccagcggctgaagctgtgggacttggcctctgggaccctctacaaagaactg
agaggccacacggacaacatcaccagcctcaccttcagtccggacagcagtctgattgcc
tccgcgtccatggacaactcggtgcgcgtctgggacatcaggaacacctactgcagcgcg
gcggccgacggctcctctggcgagctcgtaggcgtgtacaccgggcagatgagcaatgtg
ctgagtgtgcagttcatggcctgcaacctccttctggtgactggaatcacgcaggaaaat
caggaacattga

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