Sturnira hondurensis: 119003677
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Entry
119003677 CDS
T07222
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
119003677 (HELZ)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
119003677 (HELZ)
3'-5' decay
Other 3'-5' decay factors
119003677 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
Bac_DnaA
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
119003677
NCBI-ProteinID:
XP_036926074
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MEDRRAEKSCEQACDSLKRQDYEMALKHCTEALLSLGQYSIADSTGTCPLEIESIKIESL
LYRIASFLQLKKYGQADEDCRHVLGEGLAQGGGTFQTVLCCMQLKGKLQLVSNILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHIEDLEDGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQFSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHIPDLTVTVNTKKSHQTWMFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLITTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLAQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDHDTQVELQFQLNRLPL
CEMHYALDRIKDNGILFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHMLQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSASKLQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPALGPHPNLGTSPSPVQRIDPHTGTSVLYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKDQHEQNRNGKSDTNNPGPEITKIRTPEKKPTESKQIDLESNPQNRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPLPAPHAQYAIPSRHFHPLPQLPRPPFPIPQQHAL
LNQQQNNLPEQPNQMPSQPNQVVQQQSPLNPLTQQPPPQLPPAYQPGPNSAFFNNAVSHR
PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNNFTDENPPGLPIGEALDRM
HGSVALETLRQQQVRLQQWNEHHAYLSQGGIPYSHHHHPHPHLQHLPQPPIGLHQPPVRA
DWKLPSSAEGEAETTVSRLQGLLRELSNRDPSEARELAEMPPPQSRLLQYRQIQTRSPPA
VPSTPSSTDHSGHFSNFNDNSRDVEVANNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYL
APDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAVGQEPFHPLSSRTV
SSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSAPQDSLAQCKELQDHSNQSSFN
FLSPESWVNATSSTPYQNIPCNGSSRAAQPRELIAPPKTIKPPPEDQLKSENLEMPSSFN
YNVLQHLGQFPPLMPNKQIAESANSSSQQSSVGSRPTMSYASALRAPPKPRPPPEQAKKS
SDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcatgtgactcactcaagaggcag
gactatgaaatggccctcaagcactgcacagaggcccttctttcccttggccagtactcc
atagccgactccacagggacgtgtccattggagatagaaagtataaaaattgagagtctt
ctttaccgaattgcctcatttttgcaactgaaaaagtatgggcaagctgatgaagattgt
aggcatgtgctgggagagggcctggcccagggcggcggcacctttcagacagtgctttgc
tgcatgcagctgaaaggaaagctccagctcgtatccaacattcttgccaagtcactgacg
ggcgagtccctgaatgggatggtaacaaaagatttaacaagactaaaaacacttctcaca
gaaacagagacggcaactagtaacgtcctctctggatatcacatagaagacttagaagat
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatacgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagttctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcatatacctgatctgacggttactgtcaacaccaaaaagtctcaccagaca
tggatgtttgctctcacctgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggagggaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgagtacctgatgcatgcaaaacaacagctaata
accacagctaagcgctgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctttctgctgaccag
ctatttacccagtccgttttagacaagtcattgaccaaaaccaactatcagtcacggttg
catgaccttctttacattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaggtgcagttgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacagctttttggtcgctttaagcttactgaaaccctttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagttcct
aaagagaagttagcacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaac
cttcggcctgatcatgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcactagacaggatcaaggacaatgggattttatttccagacatc
actatgactccaaccataccttggagtcccaacagacagtgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaggctgttctggccattacaaccccactttcaatacag
ctgcctcctgttctcatcattgggccgtacggaacaggcaaaacattcacgctggcccag
gctgtaaagcacatgctccagcagcaggagacgagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaaccgctgggtaaaaactgttcaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaagcaccgagtcgttgttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacgcacattctgttagatgaagctgcccaggct
atggagtgtgaaaccattatgcctctagcattagcaactaaaaacactcggatcgtcctg
gctggtgaccacatgcagctaagtccttttgtttacagcgagtttgccagggaaagaaac
cttcatgtttcattactggatcggctctatgagcattaccctgccgagtttccgtgtagg
atcctcctctgcgagaactaccgctcccacgaagcgatcatcaattacacctctgagctc
ttctatgagggcaaactgatggccagcggaaagcagccagcacacaaggatttctaccca
ctaactttctttacagcacgaggggaagatgtgcaggaaaaaaacagcacagctttttat
aataatgcggaggtatttgaagtggtggaacgcgtggaagagttaagaaggaagtggcca
gttgcgtgggggaagttagatgatggcagcattggtgtggtaactccatatgctgatcaa
gtgtttaggatacgtgccgaacttcgaaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcaatttagagttttgtttcttagcacggtacgtacaagg
catacgtgtaaacataaacagacaccaattaaaaagaaagagcagctgctggaagattcc
acagaggacttagattatggttttttatccaactacaaacttctcaacactgccatcacc
agagcacagtccctcgttgctgtggtgggtgatcccatcgccctatgctctattggaaga
tgcaggaaattttgggagcggtttattgccctgtgccatgaaaataatagcctacatgga
atcactttcgagcagatcaaagctcagctagaggctttagaactgaagaagacatacgtg
ttgaatccactggcacccgaatttatcccgcgggctctaagactgcagcattcaggaagt
gccagcaagctgcagcagtcacctcccaaggggaaaagcctccatcatacccagaatgat
catttccagaatgatggaattgttcaacccaatccttctgtactcattgggaatcccatt
agagcgtatactcctccacccgctcttggacctcacccgaatttggggacatctccaagc
cctgttcagagaatagaccctcacactgggacaagtgtcctttatgtgcctgctgtctat
ggggggaacgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgctgttgatcctcgaatcattacacaccaggcagcgatggcctataatatgaacctc
ttacagacacatggacgggggtctcctataccgtatggccttgggcatcatccacctgtc
agtatagggcagccacaaaaccagcatcaggagaaggatcaacatgagcaaaatcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattactaagattcgaacaccagagaaa
aagcctacagaatcaaaacagattgatttggaatccaatccacagaacagaagtcctgaa
tcacgtcctggtgttgtttatcctaataccaaatttcatcgcaaagataatctcaacccc
agacacataaaccttccccttcctgcgccccatgcgcagtatgcaatccccagtcgtcat
tttcatccccttccccagctcccaagaccaccgtttccaattccacagcagcacgccttg
ttaaatcagcagcagaataatttgcccgaacaacccaatcaaatgccatcccaaccgaat
caggtagtccagcagcagagtccgctgaatcccctgactcagcagccacctcctcagctt
cctcctgcctaccagccagggcccaacagtgctttctttaacaatgcagtttctcatcga
ccccagtcgcctcctgcagaggctgtgattcctgagcagcagccccctcccatgctgcaa
gaaggtcacagtcccctgcgagccattgcgcagcctggccccattcttccttcgcatctg
aataacttcactgatgagaaccccccaggattgcctataggggaggctctagatcgtatg
catgggagtgtggccctggaaacattaaggcagcagcaagtgcggttacagcagtggaat
gagcatcacgcctatctgagtcagggcggtattccatactcacaccatcaccatcctcac
cctcacctccagcaccttcctcagccgcccattgggttacatcagcctccagtgagggcg
gactggaagctccctagcagtgctgaaggcgaagcagaaacaacggtttccaggttgcaa
ggcttactcagagaactgtctaatcgtgatccaagtgaagcgcgggaactagctgaaatg
ccaccacctcaatcaagacttttgcaatatagacaaattcagactaggagcccaccagca
gtcccatctaccccttccagtacagaccacagtggccacttttctaactttaatgacaac
agcagagacgttgaagtagccaacaaccccgcatttccacagcgcctaccaccccagata
tttagctcacctttctcgttgccatctgaacaccttgccccgcctcccttgaaatacctg
gcacccgatggagcatggacttttgctaacttacaacagaatcacctaatggggccgggt
tttccctatggcctacctccgctgcctcacaggccaccgcagaatccttttgtacaaata
cagaaccatcaacatgctgtcggtcaagagccatttcacccactgtcatctcgaacagta
tcttcttcttcgctccctagcttagaagagtatgaacccagaggacctggtcggcccttg
taccaaagaagaatctcctctagctcagttcagccatgttctgaagaagtgagtgctcct
caagacagtcttgctcagtgtaaagagctgcaggaccatagtaaccaatcttctttcaac
tttctatccccggagtcctgggtaaacgccacctcatctaccccctatcagaacattccg
tgcaatggatccagcagggcagctcagcccagagagttgatagctccgcccaagaccatc
aaacctccccccgaggatcaattgaagtctgaaaacctcgagatgcccagttccttcaac
tataatgtgctgcagcatctcggccagttccccccgctcatgcccaacaagcagatcgcg
gagtcggccaacagcagcagccagcagagctcggtgggcagcaggcccaccatgtcctat
gccagtgctctgcgggcgccccccaagcccaggcccccgcctgagcaagccaagaagagc
agcgaccctctgtccctgttccaggaactcagcctggggagctcttcgggcagcaacggc
ttttactcctattttaaataa
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integrated database retrieval system
