Shewanella putrefaciens 200: Sput200_0013
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Entry
Sput200_0013 CDS
T02015
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00071
Fatty acid degradation
shp00280
Valine, leucine and isoleucine degradation
shp00310
Lysine degradation
shp00362
Benzoate degradation
shp00380
Tryptophan metabolism
shp00410
beta-Alanine metabolism
shp00640
Propanoate metabolism
shp00650
Butanoate metabolism
shp00907
Pinene, camphor and geraniol degradation
shp00930
Caprolactam degradation
shp01100
Metabolic pathways
shp01110
Biosynthesis of secondary metabolites
shp01120
Microbial metabolism in diverse environments
shp01200
Carbon metabolism
shp01212
Fatty acid metabolism
Module
shp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sput200_0013
00650 Butanoate metabolism
Sput200_0013
09103 Lipid metabolism
00071 Fatty acid degradation
Sput200_0013
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sput200_0013
00310 Lysine degradation
Sput200_0013
00380 Tryptophan metabolism
Sput200_0013
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sput200_0013
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sput200_0013
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sput200_0013
00930 Caprolactam degradation
Sput200_0013
Enzymes [BR:
shp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sput200_0013
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sput200_0013
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sput200_0013
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Sput200_0013
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADV52504
UniProt:
E6XNK1
LinkDB
All DBs
Position
complement(17033..19183)
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AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQNSNIKALVLTSS
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGNDQRAEDALK
VGAVDAVVAPEALETAAIQMLKDAVAEKLDWQTRRNRKLSALTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKLL
SAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKIKAQVLAEVEGYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSRGKP
KKDVDPTSYGLLKDAFGDLKAFEADDIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADTYAHLGGLYQVTDAMRTKATNNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaagttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaaccctcgcttcgctcgat
gccgcattagacagcatcaagcaaaattccaatatcaaagcgttagtgctgacctcaagt
aaagatacctttattgtgggtgccgacattaccgaatttttaggcctatttgcacaagat
gatgcagtactgctctcttgggttgaacaagccaacgctgtcttcaacaaactcgaagac
ttacctttcccaaccgcatctgcaatcaaaggctttgccttaggtggcggctgtgaaacc
attctggcaacggattttcgtatcgcagataccacagccaaaatcggtttacctgaaact
aaactcggcatcatcccaggctttggcggcacagttcgcctgccacgtgtaattggtgca
gataacgcacttgaatggatcaccacaggtaacgaccaacgtgctgaagatgcactgaaa
gtcggtgctgtagatgccgtggttgcaccagaagcgttagaaactgctgcgattcaaatg
ctcaaagatgctgttgcagaaaagctggattggcaaacgcgtcgtaaccgcaagctgtct
gccctaacgctgcccaaacttgaagctatgatgtcattcaccacagctaaaggcatggtg
tttgctgttgcgggtaaacactacccagcaccaatggccgcagtaagcgtgattgagcaa
gcatcgactaaaggtcgtgctgaagcattacaaatcgaacatcaagcctttatcaagctg
gctaaaaccgacgttgctaaggcacttataggtatcttccttaatgatcaactcgttaaa
ggcaaagcgaaaaaagcgggtaagttagccaaagaagtgaaaaacgctgccgtattaggt
gctggcattatgggcggcggcatcgcctaccaaagcgccagcaaaggcacaccgattgtc
atgaaagacattgcccagccagcattagatttaggcctcaatgaagccgccaaactgcta
tcggcgcaagttgctcgtggccgttcaacgccagaaaaaatggccaaagtgctgaacaac
atcacgccttcattagattatgctgcgctcaaacacagtgatgtcgtcgttgaagccgtt
gttgaacatccaaaaattaaagcacaggttttagccgaagttgaaggttatgtgagtgaa
gatgcgattatcgcgtcaaacacctcaacgatttcaatcaacttgctcgctaagagcatg
aagaaacctgagcgtttctgcggtatgcatttcttcaacccagtgcacaaaatgccgttg
gtagaagttatccgtggcgagcacagctctgaagaaaccatcgcctctgttgtggcttac
gccagcaaaatgggcaaaaccccaatcgtggttaatgattgcccaggcttcttcgttaac
cgcgtactcttcccttactttgcaggctttaacggcctacttgccgaaggtggcgacttt
gctgcaatcgacaaagttatggaaaaacaatttggttggccaatgggcccagcttatcta
ctcgacgtagtgggtttagacacaggtcaccatgcccaagccgttatggctgaaggtttc
cctgatcgcatgggtaaatcaggcactgatgcgattgatgtgatgtttgagaacaaacgt
cttggccagaaaaatggcaaaggtttctatgtctattcagtcgatagccgtggcaaaccg
aagaaagatgtcgatcctacgagctacggcctattgaaagatgcctttggcgacttaaaa
gcctttgaagccgatgacattattgcccgtacaatgatccctatgatcatcgaaaccgtg
cgctgtttagaagaaggcattgtcgcatcacctgccgaagcggatatgggcctggtttat
ggcttaggtttcccgccattcagaggcggcgtgttccgttacttggataccatgggtgtc
gcaaactttgtggccttagcagacacatatgctcacttgggcggtctgtatcaagtcaca
gatgcaatgcgtacaaaagccaccaataatggtagctactaccaagcctaa
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