Shewanella putrefaciens 200: Sput200_0783
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Entry
Sput200_0783 CDS
T02015
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shp03009
]
Sput200_0783
Enzymes [BR:
shp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Sput200_0783
Ribosome biogenesis [BR:
shp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sput200_0783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADV53262
UniProt:
E6XKE3
LinkDB
All DBs
Position
876039..876728
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AA seq
229 aa
AA seq
DB search
MRLDKFICESTSLTRSLAKKALHRGDITCDGVVIKDAGFKVTEGMQICLEGEPIVLVGER
YVMLNKPVDTICSTIDEAYPSVLSLLDIPKPETLHIAGRLDADTTGLVLITSDGQWSHKI
TSPKKECGKRYLVQLADPVDDGLIEVFAKGVALRNEDGLTKPAVLEIIDPQQVRLTITEG
KYHQVKRMFAAVGNLVVGLHRERIGQIELDPDLALGEWRYLTAEEIASI
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttagacaaatttatttgtgaaagtacctctctcacccgttcattggccaaaaaa
gcgttgcaccgcggtgatatcacctgtgatggcgtggttattaaagacgctggttttaaa
gtcactgagggaatgcagatttgccttgagggagaacccattgttttagtgggtgagcgt
tatgtgatgctcaataaacccgttgatacgatttgttcaaccatcgatgaggcttatcca
tcagtgttaagtctgctcgatatcccgaagcctgaaaccttgcatattgccggtcgttta
gatgctgatacgacgggacttgtgttgatcaccagcgatggtcagtggtcacacaaaatc
acatcgcctaaaaaagaatgcggtaagcgttacttagtgcaactagccgaccctgtggat
gacggcctaattgaggtctttgcgaaaggggttgcactgcgtaatgaagatggtctgaca
aaacctgcggtcttagagattattgatccgcaacaggttcgtttaaccattaccgagggg
aaatatcaccaagtgaagcgtatgttcgccgctgttggtaaccttgtggtgggattgcac
cgtgaacgtattgggcaaattgagttagatccagatttagccctaggtgagtggcgttac
ttaaccgctgaagagatcgcttcaatctga
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