Shewanella putrefaciens 200: Sput200_0976
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Entry
Sput200_0976 CDS
T02015
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sput200_0976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_0976
Enzymes [BR:
shp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sput200_0976
DNA repair and recombination proteins [BR:
shp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sput200_0976
Prokaryotic type
Sput200_0976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADV53451
LinkDB
All DBs
Position
1085933..1086598
Genome browser
AA seq
221 aa
AA seq
DB search
MTFTTWQAFIDNQRAQPYYQQLIAFVNKERQSGKVIYPPKEDVFNAFKMTPLENVRVVLI
GQDPYHGPNQAHGLCFSVRHGIKPPPSLANMYKELVNDIPGFHIPNHGDLTFWAEQGILM
LNTVLTVEQGQAHSHANAGWEEFTSEALKLLNDQPRPIIFVLWGSHAIKKGKVITAPQHQ
VLSGPHPSPLSAYRGFFGCGHFSRVNQLLAARGEIPIQWQV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttacgacttggcaggcctttattgataatcaacgtgctcagccctattaccaa
cagttaattgcatttgtgaataaagaacggcaatcgggtaaagtaatttatcctcctaag
gaggatgtgttcaatgcttttaagatgactccccttgaaaatgttcgagtcgtactgatt
gggcaagatccttaccatggcccaaatcaggcgcacgggctgtgtttttcggttaggcat
ggcattaagcctccgccatcattggccaatatgtataaagaacttgtcaatgatattcct
ggtttccacattcccaaccacggcgatttaaccttctgggctgagcaggggattttaatg
ctcaatacggtattaacggttgagcaaggccaagctcactcacatgccaatgcgggctgg
gaggaatttacctctgaggcattaaaattgttaaacgaccaacctaggccgattattttt
gtgctgtgggggagccatgcaataaagaaaggtaaagtcatcaccgcgccccagcatcaa
gtgttgtcagggccgcatccatcacccttatccgcttaccgtggattctttggttgtggg
catttttcaagggtgaatcaattgctcgcagctcggggtgaaatccccatacaatggcaa
gtttaa
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