Shewanella putrefaciens 200: Sput200_0999
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Entry
Sput200_0999 CDS
T02015
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shp03009
]
Sput200_0999
03016 Transfer RNA biogenesis [BR:
shp03016
]
Sput200_0999
Enzymes [BR:
shp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Sput200_0999
5.4.99.29 23S rRNA pseudouridine746 synthase
Sput200_0999
Ribosome biogenesis [BR:
shp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sput200_0999
Transfer RNA biogenesis [BR:
shp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sput200_0999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADV53474
UniProt:
E6XMG9
LinkDB
All DBs
Position
complement(1109876..1111600)
Genome browser
AA seq
574 aa
AA seq
DB search
MHLQPSCFTSFTQAIDAYALPQRFTFPFYYEPHPLCVIAANELQHHLETQNDWQHNFGLT
GELTGAIGKMFGVLLVQDPQGEVGYLSAFSGKLAEQNHWPRFVPPVFDMLAKDNFFHAEN
LQINQINEQLLAVENHPDIPRLLSELNAEQAQAQAKLAAHRQVMTDGRQSRKAQRHQLAV
QWAANPTDETLRENAVTEAKLSQESINEKNQLRDIKHYWDERIHAISQALTLLTDKRDAL
RQQRKQLSAALQQKLFEQYRFLNIQGAEKSLNGIFNGTVELTPPAGSGECAAPKLLHYAF
KHGLKPLAIAEFWWGAPPKSEIRQHKQFYPACLRKCQPILGHMLEGLVVDDNPLLTNPAE
GKTLSILYQDEAMAIVNKPAEFLSVPGKEIEDSVYSRMQQTFPNATGPLIVHRLDMSTSG
LMVIALTKDAHKQLQKQFIQRTVTKRYVALLAGIPTAMADKQAAGQISLPLRGDLDDRPR
QLVCHEFGKAAQTHWELSHIDEMARTARVYLFPKTGRTHQLRVHCAHSEGLNTPIVGDDL
YGTRANRLHLHADLLMLQHPVTREQMRFQIDPDF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcagccttcttgctttacctctttcacacaagccattgatgcctatgcccta
ccgcagcgttttacctttcctttctattacgaaccgcatccactgtgcgtgatcgctgcc
aacgaattacaacaccaccttgagactcaaaatgattggcaacataactttggcctaacg
ggtgagttaaccggtgccataggtaaaatgtttggtgtgcttttagtacaagatccgcag
ggcgaagtaggctatttgtcggcattttcgggtaagttagccgagcaaaaccattggcca
cgcttcgttccacctgtgtttgatatgctggctaaggataattttttccacgcagaaaat
ctgcaaatcaaccaaattaacgagcagctacttgcagtagaaaatcaccccgatattcct
cggctattgagcgaactcaacgctgagcaagctcaagcacaagccaagcttgccgcccac
aggcaagtgatgaccgatggtcgccaatcccgcaaggcgcaacgccatcaactcgcagtg
caatgggctgccaatccgacggatgagacattgcgtgaaaacgcagtaacagaggctaag
cttagccaagaaagtatcaatgaaaagaatcagttaagagatattaaacactactgggat
gaacgtatccatgccatcagccaagcgttaactctgctcactgataagcgtgacgcgtta
agacaacagcgtaaacagctctcggcggcgctgcagcaaaagctgtttgagcaatatcgt
tttttgaatattcaaggcgcagaaaagagccttaacggcatatttaacgggacggttgag
ttaaccccgcccgcaggctcgggagaatgtgccgcacctaagttgctacattacgctttt
aaacatggtcttaaaccattggcgattgccgaattttggtggggcgcaccgccaaaatca
gaaattcgccaacacaaacagttttatcccgcctgcctgcgtaaatgccaacctatcttg
gggcatatgctcgaagggcttgttgtcgatgataatccactgctgacgaaccccgccgaa
ggcaaaaccttaagcatcctctaccaagacgaggcgatggcgattgtgaacaaacccgcc
gagtttttatccgtgcccggaaaagagattgaagactcagtgtattcgcgcatgcagcaa
acctttcctaatgccaccgggccgcttatcgtccacaggctcgatatgtcgacctcggga
ttaatggtgatcgcattgacaaaagacgcccataaacagctgcaaaaacagtttatccag
cgcacagtgactaagcgttatgtggcacttttagcagggatccctacagcaatggcagat
aaacaggcagcgggacaaatctctttacccctacgtggcgatttagacgatagaccgagg
caactggtttgccacgagtttggcaaagcggcccaaacccattgggaattaagccatatc
gatgaaatggcacgtacagcccgcgtgtatctatttcctaaaacaggccgaacccatcaa
ctcagagtgcactgcgcccattccgaggggctaaatacgcccattgtgggtgacgatctg
tacggcactcgcgccaatcggctgcatctccatgccgatttattgatgcttcaacatccc
gtcacccgtgaacagatgcgctttcaaattgatcccgatttttga
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