Shewanella putrefaciens 200: Sput200_1147
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Entry
Sput200_1147 CDS
T02015
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sput200_1147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shp03019
]
Sput200_1147
Messenger RNA biogenesis [BR:
shp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sput200_1147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ADV53619
UniProt:
E6XNR6
LinkDB
All DBs
Position
1284340..1284864
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AA seq
174 aa
AA seq
DB search
MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGL
RPEHVDILTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAATALSFQTQEIPRKRGRQKTTG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatagcgacggctttcgcgcaaatgtgggcataataatttgtaacagatatggt
caagttatgtgggctagacgttttggccaacattcttggcaattccctcaaggtggtgtt
gacgatggtgagtcagcagaggaggctatgtaccgtgagttatatgaagaagtcggccta
agacccgaacacgtagatatattaacctcgactcgttcttggttaaggtatcgtctacct
aagcgtttagtgaggcaagacagtaaaccagtctgcattgggcaaaagcaaaaatggttt
ctgttacaattgaaaagccaagatagtgcgattaatttaagttcttcagggcatcctgaa
tttgacgattggcgttgggtaagttattggtatcccgtgcgacaagtcgtttcatttaag
cgtgatgtatatcgaaaagtgatgaaagagtttgcggcaacggcattgtcattccaaacc
caggaaattccgaggaagcggggaaggcaaaaaacgacaggctga
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