Shewanella putrefaciens 200: Sput200_1288
Help
Entry
Sput200_1288 CDS
T02015
Name
(GenBank) glycine cleavage system transcriptional activator, GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shp03000
]
Sput200_1288
Transcription factors [BR:
shp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sput200_1288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADV53759
UniProt:
E6XQD5
LinkDB
All DBs
Position
1444531..1445442
Genome browser
AA seq
303 aa
AA seq
DB search
MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKN
PDIDVRIKAVDSEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPLLLNGPKPL
SQPSDLKYHTLLHDMSRHDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFAEESRSEL
LPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgattaccaccgcttaatgcggttaaagcatttgaagccgccgcacggcac
ttgagctttactcgagccgctgaagaattgtttgttactcaagctgcggtgagtcatcaa
ataaaggcattagaagactttctcggattaaaattatttcgccgaaagaatcgttctttg
ttgttaactgaagaagggcagagttacttcctcgatattaaagatatctttatccagctt
gccgatgcgacagatagattattggcgcgaagtgcaataggttctttaactgtgagtatg
tcgcccagttttgccatccaatggctagtacctcggcttgctaagttcagtgagaaaaat
cctgatattgacgtacgtataaaagccgtcgatagcgaggcgagttctttaacggacgat
gtggatgtcgctatttattacggtcttggtaattggccagggcttcgtgccgataagctg
agaaatgaagtattaattcctgtgtgttccccgctgctactcaacggtcctaaacctcta
tctcaacctagtgatttaaagtatcacacgctactgcatgatatgagtcgtcacgattgg
caggcatggtttaggcaatgtgggattaccgatattaatgtgaatcaagggcctattttt
agtcattcgtctttagtattgcaggcggcagcccatggtcaaggggttgctctgggttac
agcgtgctggcacgccccgatatcaaagctgggcggcttgtgtgcccattccaagaagtc
ttggtcagtaaagatgcttactacttagtttgccaacaaaatcatgccgaactgggtaaa
gtggtggcgtttcgcgaatggatgttagatatgtttgccgaggagtctcgcagtgagttg
ttgcccggataa
DBGET
integrated database retrieval system
