Shewanella putrefaciens 200: Sput200_1586
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Entry
Sput200_1586 CDS
T02015
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sput200_1586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_1586
Enzymes [BR:
shp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Sput200_1586
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Sput200_1586
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sput200_1586
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sput200_1586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Aminotran_1_2
SPC22
Motif
Other DBs
NCBI-ProteinID:
ADV54047
UniProt:
E6XGL1
LinkDB
All DBs
Position
complement(1791750..1793162)
Genome browser
AA seq
470 aa
AA seq
DB search
MSIPFQPSIFWHDYETFGANPARDRPAQFAGIRTDLDLNIIGEPETFYCKQATDYLPSPE
AILITGITPQLANLKGIPETEFMGRIQALFSQPNTCVAGYNSLRFDDEVTRYGFYRNFID
PYAREWQNGNSRWDIIDLVRACYAFRPDGINWSLKDDGSPSFKLEHLTQANGLSHEKAHD
AMSDVYATIAMAKLIREKQPKLYHYYFELRRKQAVSDQIDVLNMQPLAHVSSKISARNGC
TTLISPVAHHPTNKNAVICVNLAMDLSPLFDLNIEQIKTRMYTARAELAEDELPIPVKQI
HLNKCPFITSAKILDDAQASRLNIDKAFAREQYKRLRNHPELREKLAQLFEHDGESTTVD
PDLMLYSGGFFSSADKAKMEIIRHTLPQNLAALELQFDDVRMPEMLFRYRARNYPELLDD
QESHRWREFCQNRLADQDYLLKLENLLQNTVDDENKQKLLAALCHYLREL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccattccagccaagcatattctggcacgactatgaaacttttggtgccaat
cccgcaagggatagacctgcacaatttgcaggcattcgaaccgatttagatctcaatatc
atcggtgaaccagaaaccttttactgtaagcaagctactgactacttaccttcacctgaa
gctattttgatcacagggattacaccacaacttgcgaatttaaaaggcattccagaaacg
gagtttatgggtcgtatccaagctcttttcagccaaccaaatacttgtgtcgctggttat
aattctctgcgctttgatgatgaagtgacccgatacggattttatcgcaactttattgat
ccctatgcaagagaatggcagaacggaaattctcgttgggatatcattgatttagtcaga
gcttgttatgcatttagacccgacggtataaactggtcactaaaagatgatggttcgcct
agctttaaattagaacatctgacccaggcaaatgggttaagccatgagaaagcccatgat
gcgatgtcggatgtatatgcgaccatcgccatggcaaaactcatcagagaaaaacaaccc
aagttatatcactactattttgagctgcgccgcaaacaagccgtcagtgatcaaatcgat
gtgcttaatatgcaacctttggcgcatgtcagttcaaaaattagtgcacgtaatggctgc
acaacattaatttcccccgttgcccatcatccaaccaataaaaatgctgttatctgcgtt
aatttagcaatggatttaagtccgttgtttgatctaaatattgaacaaattaaaactcgg
atgtataccgccagagccgaacttgccgaagatgaattgcctatcccagtaaaacaaatc
catctcaataaatgcccttttattacctcggctaaaattttggacgatgctcaggcctca
aggcttaatatcgataaagcattcgcaagggagcaatataagcgattaaggaatcatcca
gagcttagggaaaaacttgcacaattatttgagcacgatggtgaaagtactaccgttgat
cctgatttaatgttgtattctggtggtttttttagttcagctgataaagctaaaatggaa
atcattcgccacactttaccgcagaatctagccgcgctcgaattacaatttgacgatgtc
cgtatgcctgaaatgctgttccgctatagggcacgcaattatccggaattacttgatgat
caagaatcccatcgctggcgtgaattttgtcaaaatcgcctcgccgaccaagattatttg
ttgaagcttgagaatctgcttcaaaataccgtagatgatgaaaacaaacaaaaactgctt
gcagcactgtgtcattatttacgtgagctataa
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