Shewanella putrefaciens 200: Sput200_1739
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Entry
Sput200_1739 CDS
T02015
Name
(GenBank) 3-hydroxymethylglutaryl-CoA lyase, LiuE
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00280
Valine, leucine and isoleucine degradation
shp00650
Butanoate metabolism
shp00907
Pinene, camphor and geraniol degradation
shp01100
Metabolic pathways
shp01120
Microbial metabolism in diverse environments
shp04146
Peroxisome
Module
shp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Sput200_1739
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sput200_1739
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sput200_1739
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sput200_1739
Enzymes [BR:
shp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Sput200_1739
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DUF4881
Motif
Other DBs
NCBI-ProteinID:
ADV54198
UniProt:
E6XI94
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All DBs
Position
complement(1974641..1975573)
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AA seq
310 aa
AA seq
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MSALDLANLSATSDKVNLFEMGPRDGLQNEAAVPTEAKVALIEALADAGVKRIESGSFVS
PKWVPQMADSGDVLRQIRRQAGVVYSALTPNVKGLELALDAKASEVAIFGAASQSFSQRN
INCSIEESIERFIPLMDMAKAANIPVRGYVSCVLGCPYEGEIAASEVARVSEILYKMGCY
EISLGDTIGVGTPLKARKMLQAVMERVPVEKLALHFHDTYGQALANITACLDLGVRSFDA
SVAGLGGCPYAKGASGNLASEDLVYMLHGLGLNTGIDLEKLALAGFGISKQLNRLNGSKV
ANAILQGAKA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctggatcttgcgaacttaagcgccacttcggataaggtaaacttattcgag
atgggtccccgtgatggcttgcagaatgaggccgccgtcccgacagaggctaaagtcgcc
ttgattgaagcccttgccgatgcgggcgtgaagcgaattgaatccggcagttttgtgtca
cccaaatgggtgccacaaatggccgatagcggcgacgtattgcgccaaattcgccgtcaa
gcgggcgtggtttacagcgccctcacccccaatgtcaaaggcttagagctagcgctggat
gcaaaagcttccgaagtcgctatctttggtgcggcgtcacaaagctttagccagcgcaat
atcaactgttcgattgaagagtcgattgaacgctttatcccgttgatggacatggcaaaa
gccgccaatatcccagttcgtggctatgtgtcctgcgttttaggttgcccctatgaagga
gaaattgcggcgagcgaagtggcaagagtgtctgaaatcctttacaaaatgggctgttac
gaaatttcgctcggcgacactatcggtgtaggcacgccgttaaaagcccgtaaaatgctg
caagccgtgatggagcgagtcccggttgaaaagctcgccctgcacttccatgacacctat
ggccaagcattagccaatattaccgcctgcctcgacttgggcgtgcgcagctttgacgcc
tcggtggcgggcttaggtggttgcccgtatgcgaaaggcgcgtcgggcaatctggcgagt
gaagacttggtctatatgctccatggtctgggcttaaacacaggtatcgatttagaaaaa
ctggcattagcgggttttgggatcagcaaacaattaaatcgtcttaatggctctaaagtc
gccaatgcaatcttacagggcgccaaagcctag
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