Shewanella putrefaciens 200: Sput200_1796
Help
Entry
Sput200_1796 CDS
T02015
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00061
Fatty acid biosynthesis
shp00071
Fatty acid degradation
shp01100
Metabolic pathways
shp01212
Fatty acid metabolism
shp02024
Quorum sensing
shp04146
Peroxisome
Module
shp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sput200_1796
00071 Fatty acid degradation
Sput200_1796
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sput200_1796
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sput200_1796
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shp01004
]
Sput200_1796
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shp04147
]
Sput200_1796
Enzymes [BR:
shp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sput200_1796
Lipid biosynthesis proteins [BR:
shp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sput200_1796
Exosome [BR:
shp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sput200_1796
Exosomal proteins of breast cancer cells
Sput200_1796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ADV54253
UniProt:
E6XJ06
LinkDB
All DBs
Position
2037617..2039290
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINHLPKDVPAEINVDQYSSLVDMFETAVAKYADQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVAIMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFARTLEEVVDQTPVKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDL
PHALSMRDTLTRGRRLQYIKPIITNDDLAFLQYTGGTTGVSKGAMLTHKNVVANVLQADG
AYSPTLKDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPAFVAELKKYPF
TALTGVNTLFNALVNSDDFSQLDFSRLKLSIGGGMAVQKAVADKWQNITKTRLLEGYGLT
EASPLLTCCPYNLDGYNGSIGFPAPSTLIQIRDDAGHVLPQGETGELFGKGPQVMKGYWQ
RPEETAKVIDKDGWLATGDIGYMDEKGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNEASGELVKVFVVAKDKSLTADDIIKHCRIHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEVKRT
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaatcatttgccaaaagatgtgcctgctgaaatcaatgttgat
cagtattcatcgcttgtcgatatgttcgagacagcggtagctaaatatgctgatcaacct
gcatttatcaatatgggtgccacactcacttatcgtaaattggaagagcgcagccgtgcc
tttgccgcttatctgcaaaatgagttaaagctcgaaaagggtgatcgtgttgcgattatg
atgccgaatcttttgcaatatcctattgcattgtttggtgttttacgtgcaggtatggtg
gttgttaacgtcaatccgctttacactccccgtgagcttaagcaccagttaattgattcc
ggcgccaaagccattgtcgtcgtatcaaactttgcccgtaccttagaagaagtcgtggat
caaacgccagtcaaaagtgtcattattacggggctgggtgatttactcagcgcaccgaag
cgaactttagtgaattttgttgttaaatacattaagaagctagtgcctaaatatgatttg
ccccatgccttatcaatgcgcgataccttaacaagggggcgccgtttgcaatatattaag
ccaattatcactaatgatgatttggctttcttacaatacacaggtggcacaacaggggta
tctaaaggtgccatgttgacccacaaaaatgtggttgcaaacgtgctccaagccgatggt
gcgtattctcctacccttaaagatggtagtgagtttgtcgtcacagcattgcctctgtac
catatttttgcgttaacggtgaattgcctattgtttttacacaagggcagccagaatctt
ttgatcaccaatcctcgtgatattccagcttttgtggcagagcttaaaaaataccctttc
accgcattaactggggtgaatacgttatttaatgcgcttgtgaacagtgacgatttttcg
caacttgatttttcccgtttaaagctgtctatcggtggtggtatggcagtacaaaaagcg
gttgcggataaatggcaaaatattactaaaacccgcttactggaaggttatggtttgaca
gaggcttcacctctgctcacttgttgcccttataatttagatggttacaacggttctatt
ggttttcccgcgccatcgaccttgatccaaatacgtgatgatgcaggtcatgtgttgccc
caaggcgaaaccggtgagttatttggtaaaggcccacaggtgatgaaaggctactggcag
cgtccagaagaaacggccaaagttattgataaagatggttggttagccacgggcgatatt
ggttatatggacgaaaaaggctttttctatatcgttgaccgtaaaaaagatatgatttta
gtctcagggtttaacgtcttccctaatgaagtagaagaggtcgttgccctgcatcccaag
gttatcgaagtcgcggctgtaggtgtaccaaatgaggctagcggagaattagtgaaggtt
tttgtggtggcaaaagataaatcgttaaccgcagatgacatcattaagcattgtcgtatt
catttaacgggatataaagtgccgaagctggtagaatttagagacgagttacctaaaacc
aatgtgggtaagatcttgcgacgagagcttagagacgaagttaagcgtacgtaa
DBGET
integrated database retrieval system
