Shewanella putrefaciens 200: Sput200_1896
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Entry
Sput200_1896 CDS
T02015
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03030
DNA replication
shp03430
Mismatch repair
shp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sput200_1896
03430 Mismatch repair
Sput200_1896
03440 Homologous recombination
Sput200_1896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shp03032
]
Sput200_1896
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_1896
Enzymes [BR:
shp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sput200_1896
DNA replication proteins [BR:
shp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sput200_1896
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sput200_1896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADV54352
UniProt:
E6XJW5
LinkDB
All DBs
Position
complement(2143479..2144117)
Genome browser
AA seq
212 aa
AA seq
DB search
MPKRPTFSPANTLVVLDFETSGLSPNQGARAIEIGAVLIENGVITQRFSELMDPGFRIST
FIEDYTGISNQMLRNAAPCHEVMARFADFIGDNHLVAHNAAFDQRFLDAEFAHIHHQYQG
QFACSLLLARRLYPLASNHQLATLVRYKQLPNNGTFHRALADAEMTGHLWLAMLADLQRD
FAITSPPFSLMQKITQKTKADVAKFIRQYSAK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaccaacgtttagtccagcaaataccctcgtcgtccttgattttgaaaca
tcgggtttatcgcccaatcaaggagctagagccatcgaaattggtgcagtattgattgaa
aatggcgtgataacccaacgattttcagagctaatggatcctggctttaggatcagcact
tttattgaagactacacagggatcagcaaccaaatgctgagaaatgccgccccctgccac
gaagtgatggcacgttttgccgattttattggcgataaccatttagtggcacacaatgca
gccttcgatcaacgctttctggatgctgaatttgcccatatccatcaccagtatcaaggc
caatttgcctgttctttactactggcaagacgtttataccccttagcgagcaatcatcaa
ctggcgactctagtacgttataaacaattgcctaataacggcacctttcaccgagcttta
gccgatgcagaaatgactggccacttatggttagccatgctggcggatttacagcgtgat
tttgcgatcacatcaccgccttttagcctaatgcaaaaaataactcaaaaaacaaaagcc
gatgtggctaaatttatccgccaatacagcgcgaaatag
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