Shewanella putrefaciens 200: Sput200_1900
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Entry
Sput200_1900 CDS
T02015
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sput200_1900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_1900
Enzymes [BR:
shp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sput200_1900
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sput200_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADV54356
UniProt:
E6XKG8
LinkDB
All DBs
Position
complement(2150433..2154119)
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AA seq
1228 aa
AA seq
DB search
MLKLIQSNQMEVLCAHLAAYLRQSVPNTRLLRSEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFTWQLCHHLLPNVPKENAFTKAAMTWKLMQLLPRLLADDAFGPLRHYLGDIS
LHALSDIHRNGLDELAHQRPADDIKLYQLCGRIADIFDQYLVYRPDWMLAWEQNQHPTTL
NKPLNEDQRWQPILWRALVAFNRDELNQSHYHRANLHSALIEVLNDPNTSLTPLPQRLFV
FGISSMAPQTLEVLYHLASRIDVIILSLSPCQHYWGDIIDPRHRARMAVQYAGKRQLAEQ
WEDKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEPCDDPNDPASHASMLHG
VQYDILEMQTLDSVLGPDAALYQNIAARRILKKDDESILVKSCHSPLREVETLHDHLLDM
LSRHPQLSPKDIVVMMPDVAAYAPYIDAVFAAKQGLHYIPYAIADRGAAQESPLINSFLN
LLGINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEAGVRWGRDQQSRLKQGV
PAFEQNSWAFGIKRLILGYALSDDAPLYQDHLVVTGIEGQSAQALGKLLNFIEALDETQQ
ILEKPQTGAVRLMELTTLLDAFYDTDEDEREQLQDIRDAIATLEQELLSAGKPIEALSTA
QADIATSLTLSIEVLQQWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKLVCLLGMND
GVYPRVQHPVGFDLMAHFGPRKGDRSRRLDDRYLFLEALLSAREQLYISYIGRSERDNSE
RIASMLVSELIEYCQLCYLPEDLSPQLATISNSEEVEKALLNEIVSQQPLQPFDPKLYQA
EMAGTKGIKQSYSQQWCPPNTRTDNGRFIDESTRIVVENEITQTAIIEEEHLDISALIRF
FRNPAQYFFNRTLKVDLSLNIQADDNDEPFSLNALERYMLQAQLLDNSISQGVLEPDIEL
LKRLKASGNLPMHPFDDLLLRQYQQDIKPLIGRTLFLKGEQQSHHADIRLSFDLAISPTT
QPSQTRRVWLEGRIDDISPKGLINYRPGSAHGRDILRLYLRHLCLMAMGYDHASYLLDMG
HFHALSPITPEHAHQLLTDLLQLFYQGQQHPLCFMPRTALAYASSEGEHAERLNEAQAEW
LDEQGEIGEGTEPHYQRLFQFPQDFTENTFGVLADRIYRPMVSLYVKDTLAQLEDFALSN
GMNLGSVNLDPAADINSVSTQQHISRGE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagttaatccagtctaatcaaatggaagtactctgtgcccatttagccgcttac
cttcgccagagtgtccccaatacacgcctattacgcagtgagcatattctggtacaaagc
cccggtatgtcgacttggttacgtcttgaaattgcaaaacaaaatggtattgcagcagca
ctcgaatttcctctgccctccagttttacatggcagttgtgccaccatttattacctaat
gtcccgaaggaaaatgccttcactaaggctgcaatgacctggaaactcatgcagttattg
ccccgtctgttagcggatgatgcctttgggccacttaggcactatttaggtgacataagt
ttacatgcgttaagtgacattcacagaaatggattggatgaattggcgcatcagcgtcct
gcagatgatattaagctgtatcagttgtgcggtcgtattgccgatattttcgatcaatat
ttagtctatcgccccgactggatgttagcttgggagcaaaaccagcaccctacaacgctc
aacaaaccactcaatgaagaccaacgctggcagcctattttatggcgcgccttagttgcc
tttaatcgagatgaactcaatcaaagccattatcacagggcaaacctgcacagcgcattg
attgaagtgctcaatgatcccaatacctcactaaccccgttgcctcaacggctctttgta
tttggtatttcatcaatggcgcctcaaacccttgaagtgctttatcatttagcaagccgt
attgatgtgattatcttgagtttgagtccatgccagcattattggggtgatattatcgat
ccacgtcaccgtgcacgcatggcggtgcaatacgcaggcaagcgccaattagcagagcaa
tgggaagataaacttgaggttggtaatcctctgttagcaaacaatggcaagatggggcgt
gagttactcgatatgttgcttgagcttcccgccgagcattgtgattttggtgatgatgtt
tactgtgaaccttgcgatgaccctaacgatcctgccagtcatgccagtatgctccacggg
gtgcaatacgatattttagagatgcagaccttagatagcgtacttgggcctgatgctgcg
ctttaccaaaatatcgcagcacgccgcatacttaaaaaagatgacgagtcaatactcgtt
aagagctgccatagtccactgcgagaagtcgagaccctacacgatcaccttctcgatatg
ttaagtcgccatccccaattgtcccccaaagatattgtcgtgatgatgcccgatgtcgcc
gcctatgcgccttatatcgatgctgtgttcgccgccaaacagggcctgcattatattccc
tatgccattgctgaccgcggcgcagcgcaggaatcgccactcattaatagttttttgaat
ttgctcgggattaatcaaagtcgtttcggcttgaccgatatcctcagcatcctcgaagta
cccgctatcttgcgccgttttcagcttgatgacgatgaattacagctgatccgccgttgg
cttgatgaggctggtgtccgctggggccgagatcaacaaagtcgcctaaagcaaggtgtc
cccgcatttgagcaaaactcttgggcctttggcataaaacggctgatcttaggttatgcc
ttaagtgacgatgcgccgctctatcaagatcatttagtggttaccggcatagaaggacaa
tcggcacaagcactcggtaaactgctcaactttatcgaagcactcgatgaaacccaacaa
atactcgaaaagccccaaacgggcgccgtgcgtttaatggaattaacgacattattagac
gccttttacgacacagatgaagacgagcgcgagcagttacaagatatccgcgatgccatt
gccaccctagaacaagagctattatccgcaggaaaaccgattgaggcactatcaacagcc
caagccgatatcgccacatcgctaaccttaagcatcgaagtattacagcaatggtttaat
cagcgtttaacggaatcccgcgtaggccaacgctatcttgcgggcagtgtcaacttttgt
acccttatgcctatgcgttctattccctttaaactggtctgtttgctcgggatgaatgac
ggtgtatatccaagggtgcaacatcctgtcggttttgatcttatggcccactttgggccg
cgcaaaggtgatcgatcccgtcgtcttgatgatagatatctgtttttagaagccctactc
tcagcgcgcgagcagttatatatcagctacattggtcgcagtgaaagggacaactcggag
cgtatcgcctcgatgcttgtctctgaactgattgaatattgtcagctttgttatctgcct
gaagatctatcgccgcagcttgccactatcagtaacagtgaagaggtagaaaaagccctg
ctcaatgagattgtcagtcaacaaccattgcaaccctttgatcctaagttgtaccaagcc
gaaatggcgggcacaaaagggatcaagcaaagttacagccaacaatggtgtccacccaat
actcgaacggataatggtcgttttatcgatgaatccactcggatagtggtcgagaatgaa
atcacacagaccgctattattgaagaagaacatctggatatttcagccttgatccgcttc
tttcgtaatccggcacaatacttctttaaccgtacactcaaggttgatttaagccttaat
attcaagctgatgacaatgacgaaccctttagcttaaatgcccttgaacgctatatgtta
caagcacaactactcgacaatagcataagccaaggtgtgttagagccggacattgagctt
ttaaaacgcctaaaagccagtggtaacttgcccatgcatccctttgacgatctactgcta
cgccaatatcagcaggacattaaaccgcttattggcaggaccttattccttaaaggcgag
cagcagagccatcatgcagacattaggctcagcttcgatttagcgatttcacccacaact
cagcccagtcaaacgcgcagagtatggcttgaaggtcgcattgatgatattagccctaag
ggactcatcaattaccgacccggcagtgcccatggccgcgatatattgaggctgtattta
cgccacctgtgccttatggcgatggggtatgaccatgctagctatctattggatatggga
cattttcatgcgctttcgcccatcacgccagagcacgcccaccagctattgactgattta
ctgcaactcttttatcaaggtcaacagcatcccctgtgttttatgccacgcaccgccctt
gcttacgcgagcagtgaaggcgaacatgctgaaagactcaatgaggcacaggctgaatgg
ctagatgaacaaggagaaataggtgaaggtacagagccacattatcaacggctattccaa
ttcccacaggattttactgaaaacacctttggcgtactcgccgaccgtatttatcgcccc
atggtcagtttatacgtgaaagacacgctggctcagcttgaggactttgccctcagtaat
ggcatgaacctcggtagtgttaacttagatccagcggccgacatcaatagcgttagcaca
caacagcatatctcacggggagaataa
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