Shewanella putrefaciens 200: Sput200_2273
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Entry
Sput200_2273 CDS
T02015
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shp03032
]
Sput200_2273
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_2273
Enzymes [BR:
shp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sput200_2273
DNA replication proteins [BR:
shp03032
]
Prokaryotic type
DNA Topoisomerases
Sput200_2273
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sput200_2273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
DUF4355
Motif
Other DBs
NCBI-ProteinID:
ADV54720
UniProt:
E6XNV0
LinkDB
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Position
complement(2591669..2594308)
Genome browser
AA seq
879 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKEFIVKSSVGHIRDLPTSSTSEGNEKVKSAAEVKKMSP
EEKAQYKKVKDQQALVSRMGVNPEKGWAAKYQILPGKEKVVKELQALADSADQIYLATDL
DREGEAIAWHLQEVIGGDPSRYQRVVFNEITKSAIQDAFSKPSTLDTNMVNAQQARRFLD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVRLVVERESEIKAFVPEEFWDVHAQLTTPAEE
SLRMEVVKHLDSAFEPINEQQALAAVQALSSASFKVISREDKATQSKPSAPFITSTLQQA
ASTRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEALESVRDMIGKAFGAKYLPAEP
IRYGSKEGAQEAHEAIRPSNVHVEATDLTDMERDAQRLYELIWRQFVSCQMTPAQYDATK
LTVKAGDYELKATGRTLRFDGWTRVQTVLKKKNEEDNTLPFVSQGDVLALKELQPKQHFT
KPPARYSEASLVKELEKRGIGRPSTYATIISTIQDRGYVKVENRRFYAEKMGEIVSERLV
SSFADLMSYDFTASMEQTLDDVARGELDWKKVLDGFYADFTKQLEKAERDPEEGGMRLNQ
MVMTDIKCPTCGRPMGIRTGTTGVFLGCSGYELPPKERCKTTMNLTPGVEAISENSEDAE
TDALRAKHRCGICGTAMDSYLIDEKRKLHVCGNNPICEGYEVEEGQFKIKGYEGPLIECD
RCGHDMELKNGRFGKYFGCTNEECKNTRKLLKNGEAAPPKEDPIYLPELKCSKSDAHFVL
RDGAAGIFLAASTFPKSRETRAPLVEELVKYRELLWPKYQYLADAPIADDEGNKAAVKFS
RKTKEQYVATEVDGKATGWSAHYVNGKWVSESSAKKAKK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctagttattgtcgaatcgccggccaaagctaagactattaataaatat
cttggtaaagaattcatcgttaaatcgagcgtaggtcacatccgagatctgccgacatca
tcgacttcagaaggcaatgaaaaggttaaatccgctgccgaagttaagaagatgtcgcca
gaagaaaaagctcaatataaaaaggtgaaggatcagcaagcgctggtgtctcgcatgggc
gttaaccctgaaaagggctgggcggctaagtaccaaattttgccaggtaaagaaaaggtc
gttaaagagttacaggcacttgccgattctgctgaccaaatctatctcgcaaccgactta
gaccgtgagggagaagctatcgcctggcatttgcaagaggtgattggtggtgatccttca
cggtatcaacgtgttgtttttaacgaaattactaagtctgcgattcaagatgcttttagc
aaaccgtcgacactcgacactaacatggttaatgcccaacaagcccgccgctttttagac
cgtgtggtgggctttatggtgtcaccactcttatggaaaaaggtggcgcgaggcttgtca
gcgggtcgagtccaatccgtcgcagttcgcttagtggttgagcgagaaagtgaaatcaaa
gcctttgtgccagaagaattttgggatgtacatgcccagttaactacaccagcagaagaa
tcgctgcggatggaagtggttaagcatttagattcagcttttgaacccatcaatgagcaa
caagcattagctgccgtgcaggctttatcttcagcgagctttaaagtcatttcccgcgaa
gataaagcgacacaaagtaaaccttcagccccttttatcacctcaactttgcagcaggct
gcgagtacccgtttagggtttggtgttaagaaaaccatgatgatggctcagcgactttat
gaagcaggccatatcacttatatgcgtactgactcaaccaatttgagccaagaagcactc
gaaagtgtgcgtgatatgattggtaaagcatttggtgccaaatatctacctgcagaacct
attcgttatggttcaaaggaaggggcacaagaggctcatgaggcgattcgtccatcaaat
gtccacgtagaggccacagatctaaccgatatggagcgtgacgctcagcgtttgtatgag
cttatttggcgtcagtttgtttcttgtcagatgacaccagcacaatatgatgcaaccaaa
ttaacggtgaaagcgggcgattacgaattaaaagccacgggacgaacgctgcgttttgat
ggttggacacgggtacaaaccgtgctcaagaagaaaaatgaagaagataatacattgcca
ttcgtgtcacagggcgatgtattagcgttgaaagagttacagcctaaacaacattttact
aagccgccagcacgatacagtgaagcttctttagttaaagaattagaaaaacgtggcatt
ggccgcccatcaacctatgcaaccatcatttcaacgattcaagatcgtggttatgtaaaa
gtcgagaatcgtcgtttctatgccgaaaaaatgggtgaaattgtcagtgaacgattagtc
agtagttttgctgatttaatgagttatgactttaccgccagcatggagcaaacattagat
gatgtggctcgcggcgaattagattggaaaaaagtgcttgatggtttctatgctgacttt
actaagcaattagaaaaagcggagcgtgatcctgaagaaggtggtatgcgtcttaaccaa
atggtgatgacggatatcaagtgcccaacttgtggtcgtcctatggggatccgtactggt
acaactggtgttttccttggttgttctggttatgagttgccccccaaagaacgctgtaag
acgacgatgaacttaacgcctggtgttgaggcgattagcgaaaacagtgaagatgctgaa
acagatgcattgcgtgcgaagcaccgctgtggtatttgcggcacggcaatggacagttac
ctgatcgatgagaagcgtaagttacacgtttgcggtaacaatccgatttgtgaaggttat
gaggttgaagaaggccaatttaagatcaaaggttatgaaggcccattgattgagtgtgat
cgctgtggccatgatatggaattaaagaatggccgttttggtaaatattttggatgtact
aacgaagaatgtaaaaatactcgtaagttactgaaaaatggtgaggcagcgccgccaaaa
gaagatcccatttacttaccagagctcaaatgcagcaaatctgacgcgcattttgtctta
cgtgatggtgccgcaggtatcttcttagcggccagtaccttccctaaatcgagggaaacc
cgtgcgccactggttgaagaattagtgaaatatcgtgaactcttatggcctaagtatcag
tatcttgcagatgcacctatcgccgatgatgaaggcaataaggctgcggtgaagtttagc
cgtaaaaccaaagagcaatatgtggcgactgaagtcgacggtaaagccactggatggtcc
gcccattatgttaatggtaaatgggtaagtgaatcatcagcaaagaaagcgaagaaataa
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