Shewanella putrefaciens 200: Sput200_2376
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Entry
Sput200_2376 CDS
T02015
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_2376
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Sput200_2376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
DUF7577
AAA_22
Helicase_C_2
T1R_D3-like
AAA_16
SLFN-g3_helicase
Zn_ribbon_3
DZR
zf-tcix
AAA
ERCC3_RAD25_C
Cas3-like_C_2
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADV54823
UniProt:
E6XPR8
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Position
2713196..2715004
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AA seq
602 aa
AA seq
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MTVLNLSPHFGRYRSFISVPVNLRDYQQQAVDAAIQHFKQSTASAVLVLPTGAGKSIVIA
ELARIAKGRVLVLTHVKELVAQNAEKVGLLTTEASIYAAGLNQKATDGKTVVASIQSAAR
GLSQFDQPFSLVIIDECHRVSLEKTSQYQQVLKHLRTKNPQLRLLGLTATPYRLGTGWIY
QQHYHGKVGSPEHAVFEHCVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANENGEY
AEAEVNDLLGHYGRATTAIVKQLIELSQHRKGIIIFAATVRHANEIFNLLNQTHAAQSAM
ITAQTHDNERDATIERFKAQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIG
RGLRIAEGKKDCLIIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTDD
DGDIIEHFGRRCQGIVEPQGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDK
RLRQVLSQQHHHLFRCQHMSLIDDDDNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFI
FPHSRTPGLKPKKYTKVTELISDADKFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENK
RG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgctaaacttgtcgcctcattttggtcgatatagatcttttatcagcgtgcca
gttaacctccgagactatcaacagcaagcagtcgatgctgccatacaacattttaagcaa
agcaccgcttcagccgtactcgtcttgcctactggtgcaggcaaaagtatcgtcatcgct
gaactggcacgtattgctaaaggtcgagtgctagtacttactcatgtgaaagaattggtt
gcacaaaatgcagagaaagtcggtttactgacaaccgaagccagtatttatgcggcggga
ctcaatcaaaaagccaccgacggaaaaaccgtcgttgccagtattcaatcagcagcgcgg
ggattatcgcagttcgatcagccattctcgttagtcattattgatgaatgccacagagtt
agcctagaaaaaaccagccaatatcagcaagtactcaagcatttacgcacgaaaaatccc
caattaagattgctcggtctcaccgccacaccctatcgccttggcactggctggatttat
cagcaacactatcacggcaaagtggggtctcccgaacatgccgtgtttgaacattgtgtg
ttcgagctgcccatcaggccactcattaaacaaggttacctcacagcgcctacgctattc
gacggcctcagtgcccagtacgatttcagccaacttaaagccaatgagaatggcgaatat
gccgaagccgaggttaatgatttgctggggcattacggccgcgcgaccactgcgattgtg
aaacaactcattgaactgagccaacatagaaaaggcattatcatttttgcggcaacggtg
cgccacgccaatgagatttttaatttactcaaccagactcacgcagcacagagcgccatg
atcacagcacaaacgcacgacaatgaacgtgacgcgacgattgaacgctttaaagcccaa
gagcttaagtttttagtcaacgtagcagtgctaacgacaggcttcgacgcgccccatgtg
gatttaattgcgattttgcggccgactgcctcagtgagtctgtttcaacaaatgatcggc
cgtggattgcgaatcgctgaaggcaaaaaagattgtcttatcatcgactatgctgccaat
ggttatgacttgtatttccccgaggtcggccaagcgaaacccaacagtaaatcggtaccc
gtgcaagtgcattgccctgtgtgcgattttgccaatatattctggggactcacggacgac
gatggcgacattatcgaacactttggtcgccgctgtcagggtatcgtcgaaccgcaaggt
aaaaagcagcagtgcgactttcgctttagatctaaatcttgccccgattgcggagaagag
aatgatatcgcggcgcgcatttgccagcactgccaatcgaccctcatcgatcccgataaa
cgcctgcgccaagtgctcagccagcagcaccatcatttattccgctgccagcatatgagc
ctcatcgacgatgacgacaatctgaaagtgcagtacctcgatatcgacggtaatgaattc
aatcgccgctttaaattgcaaacgccggcccagtggcgagccctatatgccttattcatc
tttccccatagccgtacaccagggttaaaaccgaaaaagtacactaaggtgacagagtta
atcagcgacgcggataaattccgcatgcccgatctcttgctgctgaagaaacataaaaaa
ggctgggatctgctcgaaagctattttgattatcaaggtcgctatcaaactgaaaataaa
cgcggctga
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