Shewanella putrefaciens 200: Sput200_2483
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Entry
Sput200_2483 CDS
T02015
Name
(GenBank) fatty acid oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00071
Fatty acid degradation
shp00280
Valine, leucine and isoleucine degradation
shp00310
Lysine degradation
shp00362
Benzoate degradation
shp00380
Tryptophan metabolism
shp00410
beta-Alanine metabolism
shp00640
Propanoate metabolism
shp00650
Butanoate metabolism
shp00907
Pinene, camphor and geraniol degradation
shp00930
Caprolactam degradation
shp01100
Metabolic pathways
shp01110
Biosynthesis of secondary metabolites
shp01120
Microbial metabolism in diverse environments
shp01200
Carbon metabolism
shp01212
Fatty acid metabolism
Module
shp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sput200_2483
00650 Butanoate metabolism
Sput200_2483
09103 Lipid metabolism
00071 Fatty acid degradation
Sput200_2483
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sput200_2483
00310 Lysine degradation
Sput200_2483
00380 Tryptophan metabolism
Sput200_2483
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sput200_2483
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sput200_2483
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sput200_2483
00930 Caprolactam degradation
Sput200_2483
Enzymes [BR:
shp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sput200_2483
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sput200_2483
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sput200_2483
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
ADV54930
LinkDB
All DBs
Position
complement(2852972..2855092)
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AA seq
706 aa
AA seq
DB search
MEKTFNLTRRDDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDPHIRGLVLISGKK
DSFVAGADISMLDACKTAADAKALSQQGHVVFNELEALKIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLVNRVLEGTSFGRNIIFDQATKQVEKK
TQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGATPRKVNKAVILGGGLMGGGIASVTTTKAKIPVRVKDISEKGLSNALSYAYKLLDK
GVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEYT
IFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNGKGFYQYGASSKKTKAVDET
VYGVLGIKPGTNKDAKALAERCVVQMLNEAVRCLDEGIIASPRDGDIGAIFGIGFPPFLG
GPFHYIDTLGAANLVKILEGYQSQFGNRFEPCERLKTMARENVSFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacctttaatttaacccgccgcgacgacggcattgccattttgactatggat
gttcctggcgaaaccatgaacaccctaaaagcacagtttggccctgaaatcagtgagatc
ctggctgaaattaaaagcgatcctcatattcgtggactcgtgctgatctctggcaaaaaa
gattctttcgttgcgggcgcggatatttccatgctcgatgcctgtaaaacggcggccgat
gccaaagccttatcccagcaagggcatgtggtttttaatgagttagaagccttaaaaatt
cctgtggttgcggcaatccacggtgcctgtttaggtggtggtttagagttagccttagct
tgtcatcaaagggtatgtagcgacgatggtaaaaccatgctcggcgtaccggaagttcaa
cttggcttattacctggcggcggtgggactcaacgtttgcctcgtttagtcggcattacc
actgccttagatatgatgctcaccggtaaacaaatccgtcctaaacaagccttgaaaatg
ggcttagtgaatgatgttgtaccgcagaccattttgctgcaaaccgccgttgagatggcg
cttgctggtaaacgtgcaccgaaacctgttaaaaagtcactcgttaatcgagtgcttgaa
ggcacgagctttggccgtaacattattttcgatcaagcgactaaacaagtcgaaaagaaa
acccaaggtaattatccagcaccagccaagattattgactgcgtgcgtcaagggattgcg
aaggggatgcaaaaagggttagaagtcgaagcgagtcattttgccgaattagtggtatca
aaagaatctgaagcgctgcgcagtatttttttcgccaccactgaaatgaagaaagaaact
ggcgcagagggtgcaacaccgcgcaaagtgaataaagcggtgatcttaggcggcggttta
atgggcggcggtatcgcctctgtgaccaccactaaggctaaaatccctgttcgggtaaaa
gacatcagcgaaaagggtttaagcaatgccttatcttatgcctataagttgttagataaa
ggggtaaagcgccgccatatgacgcctgctgcccgtgacaacttaatggcgctgatgact
acaaccactgagtataaaggcgttaaagatgccgacatcgtagtggaagcggtatttgaa
gacttagcgcttaagcatcaaatggtgaaagacattgagcgtgagtgtggtgagtacact
atttttgcgtcaaacacctcatctttgcctattagccaaattgccgaggcggcgacgcgt
cctgagaatgtaattggtctacattatttctcaccagtggaaaaaatgccgctggtggaa
gtgattgcccacgcgaaaacgtcgccagaaaccattgcgacaaccgtcgcatttgcccgt
aagcaaggtaaaacaccgatagtggtacaggatggcgcgggtttctacgtgaaccgtatt
ctggctctgtatatgaatgaggccgcgcaattactactcgaaggccaaagtgttgagcat
ttggataaagctttagtgaaatttggcttccctgtgggaccgattactttgctcgacgaa
gtgggtatcgacgtgggcgcaaaaatttcaccgatccttgagaaagaattgggtgaacgt
tttaaagcgccagccgcattcgacaagcttttaggtgacgatcgtaaaggccgtaaaaat
ggtaaaggcttttatcaatacggcgcatcgagcaagaaaactaaagctgtagatgaaact
gtgtatggcgtattaggcattaagcctggcaccaataaagacgcaaaagcacttgctgag
cgttgtgttgtacaaatgctcaatgaagcggtgcgttgcttggatgagggtattattgca
tcgccaagagacggtgatattggcgctattttcggtattggtttcccgccattcctcggt
ggtccattccattatattgacactttaggcgccgcgaacttagtgaagatccttgaaggt
tatcaaagtcaattcggtaacagattcgaaccttgtgagcgtttaaaaacgatggctaga
gagaatgttagctttttctaa
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