Shewanella putrefaciens 200: Sput200_2541
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Entry
Sput200_2541 CDS
T02015
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shp03036
]
Sput200_2541
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_2541
Chromosome and associated proteins [BR:
shp03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Sput200_2541
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sput200_2541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
PFam54_60
SKA2
Bacillus_HBL
YkyA
DUF948
Allexi_40kDa
Motif
Other DBs
NCBI-ProteinID:
ADV54985
UniProt:
E6XRF8
LinkDB
All DBs
Position
2931681..2932073
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AA seq
130 aa
AA seq
DB search
MSDFLEILTHGRRFKAAVKDLSIEELRDLASKLDKILSERESMAEEEQQMIAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKAPSKKRPPRPAKYQIEVDGEMIQWTGQGRMPTVFKNEVN
KGRSMDDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttttagaaatattaactcacggacgtcgttttaaagctgcagtaaaagat
ctcagcattgaagaactacgagatttagcctcaaagctagataaaattttatctgagcgt
gaatcaatggctgaagaagaacagcaaatgattgctgctcgtaatgctaagattgaagaa
atccgtcaacaaatggaagcggtaggcttatccattgatgatctcggcggtgtagcagtt
aaagctccaagcaaaaagcgtccacctcgcccagcgaaatatcaaattgaagttgacggt
gaaatgatccagtggacaggccaaggccgcatgccaaccgtatttaagaacgaagtcaac
aaaggccgttctatggatgatttcttaatctaa
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