Shewanella putrefaciens 200: Sput200_2851
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Entry
Sput200_2851 CDS
T02015
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_2851
Enzymes [BR:
shp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sput200_2851
DNA repair and recombination proteins [BR:
shp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sput200_2851
Prokaryotic type
Sput200_2851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADV55254
UniProt:
E6XHN5
LinkDB
All DBs
Position
complement(3212802..3214283)
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AA seq
493 aa
AA seq
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MISLKEQMATSNVGDTLMWFRQDLRLADNQALTAACDWARAQGTALRAIYIATPIQWACH
DVAPIQLDFIERHINLLAKGLGCLGIQFELIQLERFADIPQFMLDYCQQHNITRVFAGSE
PEINERVRDQACIDAGVPLLLTDEHCLLAPGTVLNLSGEMYRVFTPFSRKWREIAARHAI
LPLGVPAPLGPVLPEPKALNLAVNKVSSEQWGAGEGQAKRLLCDFVQQKVQDYKQDRDFP
ALDGTSCISPYLAIGVLSARQCVAALLQRFPEVIVDDTSLGRTWLNELVWREFYRHLLVA
FPDLSKNHNFNRQADQVQWRNNIEEFKAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVV
ASFLTKHLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEK
FDPDGSFIRKYLPELASWGIKQLHQPNTAKTPLLFKQPLFAEQAAYPSAIVDHTEARVRA
LSVLGVLKKASAL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgatatcacttaaagaacaaatggctacgtcaaatgtaggcgatacactgatgtggttt
cgtcaagatttaagacttgccgataatcaagcattaacagcggcttgcgattgggcaagg
gcgcaaggtactgcacttagggctatatatattgcaactcccatccagtgggcatgccat
gatgtagcgcctattcaattagattttattgaacgtcatattaatctgcttgcgaaaggg
cttggatgtttaggtattcagtttgagttaattcaattagagcgttttgcggatatccca
caatttatgcttgattattgtcagcagcacaatattacaagggtgtttgctggctcagag
ccagagataaacgaacgagttcgcgatcaggcatgcattgatgcgggtgtgccgctgttg
ttaactgatgaacattgtttgctcgcgccaggcacagtgttgaacttatcgggtgaaatg
tatcgagtttttaccccttttagtcggaagtggcgagaaattgccgcccgccatgccatt
ttgccgctaggagttcctgcaccacttgggcccgttttaccagaacctaaagcgttaaat
ttagccgtgaataaagtctcgagcgaacaatggggcgcgggagaagggcaagctaagcgt
ttgctgtgcgattttgtacagcaaaaagtgcaagattataaacaggatcgtgattttccg
gccctagatgggacgagttgtatttctccttatttggcgattggcgtgctcagtgcacgc
caatgtgtggccgcattattacagcgttttcctgaggtgatcgtggatgatacaagcctt
ggccgaacttggcttaacgagcttgtctggcgtgagttttatcgtcatttattagtcgca
tttccagacttatctaaaaatcataattttaatcgtcaagcagaccaagttcagtggcgt
aataatattgaagagtttaaggcttggtgcgagggacgaactggttatcctattgttgat
gcagctatgcgtcagcttaatcaaacaggttggatgcacaatcgcctgcgtatggtggtc
gccagtttcttaaccaaacatttgttaattgactggcgttggggtgagcgctatttccgc
caaaaactcattgatggtgacttagcggctaataatggtggctggcaatggtctgccgga
tgtggatgtgatgcccaaccttatttccgtatttttaatccaatgagccagagtgaaaag
tttgatccagatggcagctttatccgtaaatacttaccagagctggcatcttggggaata
aagcaactgcatcaacccaataccgctaagactcctttattgtttaaacagccattattt
gccgaacaagccgcttatccgagtgccatagtggatcacaccgaagcaagggttagagca
ttaagtgtgctcggcgtattgaaaaaggcttctgccttataa
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