Shewanella putrefaciens 200: Sput200_2907
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Entry
Sput200_2907 CDS
T02015
Name
(GenBank) transcriptional regulator, LysR family
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shp03000
]
Sput200_2907
Transcription factors [BR:
shp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sput200_2907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_8
HTH_30
HTH_20
HTH_IclR
DUF2089
Motif
Other DBs
NCBI-ProteinID:
ADV55309
UniProt:
E6XIF8
LinkDB
All DBs
Position
complement(3290047..3290946)
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AA seq
299 aa
AA seq
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MSDDLGSELQLLYLFVHLVNAGSFSQAAKELDMPIATVSRKLAKLEEKLDKQLFMRSTRK
LRLTEEGLALFQRYQSVIAQFDELSGVGSDKPEGTLRIAAPISIISIIFIRALNEFGRLY
PDIRLHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYCLFATPEYLAQAPKL
THPNDLEAHQLIKVWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIESALDHGGILYGP
ELFVKQQIKEGRLKVLLPEWVGEQRRISILYHQRSQQPLKVRVFIEFMQSKAPELFSMA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatttgggcagtgaattacaacttctttatctttttgtgcacttagtgaat
gcgggaagtttttcacaggcggccaaagagttggatatgcctattgcgaccgtgagtcgt
aagttagccaaattagaagaaaagctcgataagcaactctttatgcgtagcactcgtaaa
ctgaggttgactgaagaaggcttagccttatttcagcgttatcagagtgtcatagcccag
tttgatgagcttagtggcgtgggaagtgataaacccgaagggacgttaagaattgccgcg
ccgatttctattatctctatcatctttatccgagctcttaatgagtttggtcgtttgtat
cccgatattcgcctgcatatatcccagagtaatgagttggttgatttgatcgacaaaggg
attgatgtggcgattgtgggtggcgctcagcctgattcttcatgggtgtcgagcacatta
ggtgagttagattactgtttatttgctacgccagaatatttagcacaggcacctaagttg
acccaccccaatgatttagaagcgcatcagcttattaaagtctggcccttatttaattgg
catttaaagcatccgaacggtgagtccttctactttaatggtccaaccaagctcacattg
acggatttacacggtgctattgagtcggcattggatcatggtggcattttgtacggtcct
gaattgtttgtaaaacagcagattaaagagggccgactcaaagtattattacctgaatgg
gtgggtgagcagcgacggatttcaatcttgtatcatcaacgcagccaacaaccgctaaag
gtgagagtgtttattgagtttatgcagtcgaaggcgccagaattgttttccatggcttga
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