Shewanella putrefaciens 200: Sput200_3452
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Entry
Sput200_3452 CDS
T02015
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shp03032
]
Sput200_3452
03036 Chromosome and associated proteins [BR:
shp03036
]
Sput200_3452
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_3452
DNA replication proteins [BR:
shp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sput200_3452
Chromosome and associated proteins [BR:
shp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sput200_3452
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sput200_3452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADV55840
UniProt:
E6XP40
LinkDB
All DBs
Position
3925240..3925512
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIAKIAENADLTKVEAARALKSFEAAITESMKNGDKISIVGFGSFETATRAARTG
RNPQTGKEIQIAEATVPKFKAGKTLRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgaacttatcgctaagattgcggaaaatgccgatctaacaaaagtggaa
gcagcacgcgcattaaagtctttcgaagcggctatcaccgaatccatgaaaaatggtgac
aaaatttctatcgtgggctttggctctttcgaaacagccacccgtgcagctcgcacaggt
cgtaacccacaaacgggtaaagaaatccaaattgcagaagcaactgtgcctaagtttaaa
gccggtaaaaccctacgcgatagcgtcaattaa
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