Shewanella putrefaciens 200: Sput200_3502
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Entry
Sput200_3502 CDS
T02015
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03420
Nucleotide excision repair
shp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sput200_3502
03430 Mismatch repair
Sput200_3502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_3502
Enzymes [BR:
shp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sput200_3502
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sput200_3502
MMR (mismatch excision repair)
Other MMR factors
Sput200_3502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADV55889
LinkDB
All DBs
Position
complement(3975652..3977820)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQV
RLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAIGFPIEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRVLAGQT
ANVMIVGDDDQSIYGWRGAQVENLHRFLQDFPTATTIRLEQNYRSKGNILKASNALIANN
PERMGKELWTDEADGDPISLYCAFNEMDEARFIVGRINDWHEKGGNLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYMRLISNKNDDAAFERVVNTPPRGIGD
RTLDILRTTARQQDLTLWQACLRLLDEKVLAGRAASAVRGFMDLIVTLQEDTQDMALYRM
ADTVIQASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCY
VGMTRAMEKLYITYAESRRIYGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMANNRFS
TQKSAAANDTGFNVGQRVNHPKFGEGKVTNFEGSGAQARVQVSFTDFGSKWLVVAYARLE
AL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactagacggcctgaatgataagcagcgcgaggctgtcgcggca
ccgcaatctagcatgttagtgttggcgggcgcgggcagtggtaaaactcgggtgttgacc
caccgtattgcgtggctgatgcaggttgaacagcagagtccgtactcgattctggcggtg
acgtttaccaataaagctgcggctgagatgcgcgaacgagttgaaaaagtcgctggtacc
aatatgggccgcatgtggattggcactttccatggcttggcacatcgcttgttgcgcact
cacttccaagatgcgggtttaccgcaaagcttccaaatcctcgattctgacgatcaagtg
cgcttgatcaaacgtattcttaaaagcctgaatttggatgagaaacaatatcctccacgc
caagctcagggttatatcaatggtaaaaaagaccaaggattacgccctaaacatatcgat
gccatcggttttcccattgagcaaaatctgttaaaaatctatcaggtttatcaagagtct
tgcgaccgcgcaggtttagtcgattttgccgaaatccttttacgtgcccatgagttatgg
cttaataagccgcatttgttggcccattatcaagaacgctttaagcatattttggtggac
gagttccaagataccaacgcgatccaatatgcgtggatccgcgtgcttgccggtcaaact
gccaatgtgatgatagtcggtgatgacgaccaatcgatttacggctggcgcggcgctcag
gttgaaaacctgcatcgcttccttcaggattttcctaccgcaaccaccattcgcctcgag
caaaactatcgctctaaggggaatattcttaaagcgtccaacgcgttaatcgccaataac
cccgagcgtatgggcaaagagttatggacggatgaagccgatggcgatccaatttcgctc
tattgcgcctttaatgaaatggatgaggcgcgctttattgtcggtcggataaatgattgg
catgaaaagggcggtaacctcagtgattgcgcaattttatatcgctcgaatgctcagtcg
cgggtattggaagaagccttattacacaaaggcttagcctatcgtatttacggtggctta
cgctttttcgagcgtcaagaaattaaagatgccatgggctatatgcgcctcatcagtaat
aaaaatgatgatgccgccttcgagcgggtggtgaatacgccgccccgtggtataggcgat
cgcaccttagatattttacgcactacggcgcgccaacaagatcttacgttatggcaagcg
tgtttaaggctgctggatgaaaaagtacttgccggccgtgcagccagtgcggtgcgtggc
tttatggatttaatcgttactctacaggaagatacgcaggatatggccttgtatcgcatg
gccgacactgtgatccaagcgtcgggccttaaggccatgtatgaagccgaaaagggcgag
aaagcccatgctcgtatcgaaaacttagaagaactcgtcaccgctgcgcgcacctttgaa
atgcctgaagagcttgaggatatgggcgagctcaatgcctttttatcccacgctgcgctt
gaagcgggtgaagggcaggccgatgcctttaccgatgcggtgcaactgatgacgctgcat
tcggccaaagggctagagtttactatggtgtttatggcgggagtcgaggaagggattttc
ccgagtaaaatggcgctcgaagagggcgacagactcgatgaagaacgccgtctctgctac
gtgggcatgacccgcgcgatggaaaaactctacattacctatgcggaatcgcgccgtatc
tatggccgcgaagattacgcgcggccgtcgcgttttatcaaagagatcccgccgcaatat
gtggatgaaattcgccttaaggcacaggtttccactcccatggcaaataatcgttttagc
actcaaaagtcggcagcggcaaatgatacgggctttaatgttggacagagagtcaatcat
cctaaatttggtgaaggcaaggtcaccaactttgaaggcagcggcgcacaggccagagtt
caggttagttttaccgactttggcagtaaatggttagtggtggcttacgctcgtttagaa
gcgctttaa
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