KEGG   Shewanella putrefaciens 200: Sput200_3597
Entry
Sput200_3597      CDS       T02015                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
shp  Shewanella putrefaciens 200
Pathway
shp00300  Lysine biosynthesis
shp00470  D-Amino acid metabolism
shp01100  Metabolic pathways
shp01110  Biosynthesis of secondary metabolites
shp01120  Microbial metabolism in diverse environments
shp01230  Biosynthesis of amino acids
Module
shp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:shp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Sput200_3597
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Sput200_3597
Enzymes [BR:shp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Sput200_3597
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: ADV55976
UniProt: E6XQR0
LinkDB
Position
complement(4083006..4084250)
AA seq 414 aa
MDHFLYHNNALHAEGCQVADLAKTYGTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVK
ANANLAVLNVLARLGSGFDIVSGGELARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIY
CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI
VFARAHALPHLKVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL
GVTYDDETPPHPDVYAAALLKRLGNRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVAPRDSEAYEFDIVGPVCETGDFLGKERKLALAAGD
LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEHAFLVREREKISQLWQGEQLLP
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttggatcactttctctaccataataatgccctgcacgccgaaggctgtcaggttgctgat
ttagccaaaacctatggcacaccactatatatatattcccgtgcgacacttgagcgccat
tggcatgcttttaataatgccgttatggatcatccacacctcatttgttatgcggtcaaa
gccaacgctaacttggccgtactgaatgtgctggcacgtttaggcagtggttttgatatt
gtgtctggcggtgagttggcaagggttatcgaagcaggaggctcccccgctaaagtggtg
ttttctggtgtgggaaaaaccgttgccgagatggagcaagcgcttaatctgggtatttac
tgttttaacgtcgaatcaagcgccgagcttgaacagttaaatctggttgcgggtcgttta
ggtaaagtagcacccgtttcattgcggattaatcccgatgtggatgcaggaacccatccc
tatatttcgaccggccttaaggaaaacaaatttggcattgctatggatgaggctgaaatt
gttttcgcccgtgcccatgcgttaccacatctaaaagtgaaaggtgtcgattgtcatatc
gggtcacaactcactgagatccaaccatttcttgatgcaatggatcgtatgctggcgctc
atagatcgtctggctgagcaaggaattgttatcgaacatttcgatgtaggcggtggttta
ggagtgacctatgatgatgaaacgccaccacatcccgatgtatatgcggctgcgttactc
aagcgtttaggcaaccgaaaacttaaactgattttcgagcctggccgtgcgattgcagct
aatgcggggatttttgtcactcaggtgctttatctgaaagaaaacagcgacaagcgtttt
gcgattgtcgatggcgcgatgaatgacctaattcgccccgcactttatagtgcatggcaa
aatattatcccagtagcgccaagagactctgaggcctatgaatttgatattgtaggccct
gtgtgtgaaacaggtgattttctaggtaaagaacgcaagctggctttagctgctggcgat
ctacttgcggtgcgttcaagtggtgcctatggttttgctatggcatccaattacaatact
cgtccccgtgcggctgaagtgatggtcgatggcgagcacgctttcttagtgcgtgagcga
gaaaaaatatctcaactctggcaaggtgagcaactcctgccgtaa

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