Shigella sp. PAMC 28760: A0259_01100
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Entry
A0259_01100 CDS
T04390
Name
(GenBank) AraC family transcriptional regulator
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shq03000
]
A0259_01100
Transcription factors [BR:
shq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
A0259_01100
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
HTH_23
DUF4924
Motif
Other DBs
NCBI-ProteinID:
AMR21334
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Position
226056..226892
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AA seq
278 aa
AA seq
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MTVLHSVDFFPSGNVSVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG
TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV
LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL
EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT
DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattacatagtgtggatttttttccgtctggtaacgtgtccgtggcgatagaa
ccccggctcccgcaggcggattttcctgaacatcatcatgattttcatgaaattgtgatt
gtcgaacatggcacgggtattcatgtgtttaatgggcagccctataccatcaccggtggc
acggtctgtttcgtacgcgatcatgatcggcatctgtatgaacataccgataatctgtgt
ctgaccaatgtgctgtatcgctcgccggatcgatttcagtttctcgccgggctgaatcag
ttgctgccacaagagctggatgggcagtatccgtctcactggcgcgttaaccacagcgta
ttgcagcaggtgcgacagctggttgcacagatggaacagcaggaaggggaaaatgattta
ccctcgaccgccagtcgcgagatcttgtttatgcaattactgctcttgctgcgtaaaagc
agtttgcaggagaacctggaaaacagcgcatcacgtctcaacttgcttctggcctggctg
gaggaccattttgccgatgaggtgaattgggatgccgtggcggatcaattttctctttca
ctgcgtacgctacatcggcagcttaagcagcaaacgggactgacgcctcagcgttacctg
aatcgcctgcgactgatgaaagcccgacatctgctacgccacagtgaggccagcgttact
gacatcgcctatcgctgtggattcagcgacagtaaccacttttcgacgctttttcgccga
gagtttaactggtcaccgcgtgatattcgtcagggacgggatggttttctgcaataa
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