Shigella sp. PAMC 28760: A0259_01560
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Entry
A0259_01560 CDS
T04390
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00730
Thiamine metabolism
shq01100
Metabolic pathways
shq01240
Biosynthesis of cofactors
Module
shq_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A0259_01560
Enzymes [BR:
shq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
A0259_01560
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AMR21413
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Position
complement(322653..324548)
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AA seq
631 aa
AA seq
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MSATKLTRREQRAQAQHFIDTLEGTAFPNSKRIYITGTQPGVRVPMREIQLSPTLIGGSK
EQPQYEENEAIPAYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKA
RLADDGLDELRFSGLLTPKRAKTGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEV
LRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AATQTIEMGMADMSENFRARGGEIYLRKEEA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacaaaactgacccgccgcgaacagcgcgcccaggcccaacattttatcgac
accctggaaggcaccgcctttcccaactcaaaacgcatttatatcactggcacacaaccc
ggcgtgcgcgtgccgatgcgtgagatccagcttagcccgacgctaattggcggcagcaaa
gaacagccgcagtacgaagaaaacgaagcgattccggcctacgacacctccggcccgtat
ggcgatccgcagattgccattaacgtgcagcaagggctggcaaaactacgccagccatgg
atcgatgcgcgcggcgataccgaagaacttaccgtgcgcagttccgattacactaaagcg
cggctggcagatgatggcctcgacgagctacgttttagcggcttattaacgccaaaacgc
gccaaaacaggacgccgcgtcacccaactgcactacgcccgccagggcatcatcacaccg
gaaatggaattcatcgccatccgcgagaatatgggccgcgagcgcatccgtagcgaagtt
ttacgccaccagcatccgggaatgagctttggcgcacgtctgccggaaaatatcactgcg
gaatttgtccgtgatgaagttgctgccggacgtgcgattatcccggccaacattaatcat
ccggaatcggagccgatgattattggccgtaacttcctggtaaaagttaacgccaatatc
ggcaactcagcggtcacctcttccatcgaagaagaagtggaaaagctggtatggtccacc
cgctggggagcggatacggtgatggatctctccaccggtcgctatattcacgaaacccgc
gagtggattttgcgtaacagcccggtgccgatcggtacagtgccgatctaccaagcgctg
gagaaggttaacgggatcgccgaagatcttacctgggaagcgttccgcgacacgctgctg
gaacaggccgagcaaggtgtggattacttcactatccatgcgggcgtactgctgcgctat
gtgccgatgaccgcgaaacgcctgaccggtatcgtctctcgcggcggttcgattatggcg
aaatggtgcctctcccatcatcaggaaaatttcctctatcaacacttccgcgaaatttgt
gaaatctgtgccgcttatgacgtttcgctgtcgctgggcgacggtctgcgccccggttct
attcaggacgccaacgatgaagcgcagtttgccgagctgcatacgctgggcgaactgacc
aaaattgcctgggaatatgacgtgcaggtgatgattgaaggcccaggccacgtgccgatg
cagatgatccgccgcaatatgaccgaggagttagagcactgccacgaagcgccgttttac
actctggggccgctaactaccgatattgcgccgggctatgaccacttcacgtcggggatt
ggtgcggcgatgattggctggtttggctgcgcgatgctctgttacgtaacgccaaaagag
catctgggtctgcccaataaagaagatgttaagcaggggcttatcacctataagattgcc
gcccacgccgctgacctggcgaaagggcatccgggcgcgcaaattcgcgataacgccatg
tcgaaagcccgcttcgaatttcgctgggaagaccagtttaatctggccctcgacccgttt
accgcccgcgcttatcacgatgaaaccctgccgcaagagtcaggtaaagtcgcccatttt
tgctccatgtgtgggccgaaattctgctcgatgaaaatcagccaggaagtgcgtgattac
gccgccacgcaaactattgaaatgggaatggcggatatgtcggagaacttccgtgccaga
ggcggagaaatctacctgcgtaaggaggaagcgtga
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