Shigella sp. PAMC 28760: A0259_02935
Help
Entry
A0259_02935 CDS
T04390
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
A0259_02935
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shq01007
]
A0259_02935
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shq03016
]
A0259_02935
Enzymes [BR:
shq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
A0259_02935
Amino acid related enzymes [BR:
shq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
A0259_02935
Transfer RNA biogenesis [BR:
shq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
A0259_02935
Prokaryotic type
A0259_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1f
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AMR21663
LinkDB
All DBs
Position
complement(612778..615633)
Genome browser
AA seq
951 aa
AA seq
DB search
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD
TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAE
SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR
TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP
RYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINI
LTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH
DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSA
LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHT
VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEK
QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQD
CGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELT
KPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQP
FPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNEN
RGFLQTLARLESITVLPADDKGPVSVAKIIDGAELLIPMAGLINKEDELARLAKEVAKIE
GEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatataacccacaagatatcgaacagccgctttacgagcactgggaaaag
cagggctactttaagcctaatggcgatgaaagccaggaaagtttctgcatcatgatcccg
ccgccgaacgtcaccggcagtttgcatatgggtcacgccttccagcaaaccatcatggat
accatgatccgctatcagcgcatgcagggcaaaaacaccctgtggcaggtcggtactgac
cacgccgggatcgctacccagatggtcgttgagcgcaagattgccgcagaagaaggtaaa
acccgtcacgactacggccgcgaagctttcatcgacaaaatttgggaatggaaagcggaa
tccggcggcaccattacccgtcagatgcgccgtctcggcaactccgtcgactgggagcgt
gaacgcttcaccatggacgaaggcctgtccaatgcggtgaaagaagttttcgttcgtcta
tataaagaagacctgatttaccgtggcaaacgcctggtaaactgggacccgaaactgcgc
accgctatctctgacctggaagtggaaaaccgcgaatcgaaaggttcgatgtggcacatc
cgctatccgctggctgacggtgcgaaaaccgcagacggtaaagattatctggtggtcgcg
actacccgtccggaaaccctgctgggcgatactggcgtagccgttaacccggaagatccg
cgttacaaagatctgattggcaaatatgtcattctgccgctggttaaccgtcgtattccg
atcgttggcgacgaacacgccgacatggaaaaaggcaccggctgcgtgaaaatcactccg
gcgcacgactttaacgactatgaagtgggtaaacgtcacgcgctgccgatgatcaacatc
ctgacctttgacggcgatatccgtgaaagcgcccaggtgttcgataccaaaggtaacgaa
tctgacgtttattccagcgagatcccggcagaattccagaaactggagcgttttgccgca
cgtaaagcagtcgttgctgcggttgacgcactcggcctgctggaagaaattaaaccgcac
gacctgaccgttccttacggcgaccgtggcggcgtggttatcgaaccaatgctgaccgac
cagtggtacgtacgtgccgatgtactggcgaagccggcggttgaagcggttgagaacggc
gacattcagttcgtaccgaagcagtacgaaaacatgtatttctcctggatgcgcgatatt
caggactggtgtatctctcgtcagctgtggtggggtcaccgtatcccggcatggtatgac
gaagcgggtaatgtttatgttggccgcaacgaagaagaagtgcgcaaggaaaataacctc
ggtgccgacgttgccctgcgtcaggacgaagacgttctcgacacctggttctcttctgcg
ctgtggaccttctctacccttggctggccggaaaacaccgacgccctgcgtcagttccac
ccaaccagcgtgatggtatccggcttcgacatcatcttcttctggattgcccgcatgatc
atgatgaccatgcacttcatcaaagatgaaaatggcaaaccgcaggtgccgttccacacc
gtttacatgaccggcctgattcgtgatgacgaaggccagaagatgtctaaatccaagggt
aacgttattgatccgctggatatggttgacggtatttcgctgccagaactgctggaaaaa
cgtaccggcaatatgatgcagccgcagctggcggacaaaatccgtaagcgcaccgagaag
cagttcccgaacggtattgagccgcacggtactgacgcgctgcgcttcaccctggcggcg
ctggcgtctaccggtcgtgacatcaactgggatatgaagcgtctggaaggttaccgtaac
ttctgtaacaagctgtggaacgccagccgctttgtgctgatgaacacggaaggtcaggat
tgcggctttaacggcggtgaaatgacgctgtcgctggcggatcgctggattctggctgag
ttcaaccagaccatcaaagcgtaccgcgaagcgctggacagcttccgcttcgatatcgct
gcaggcattctgtatgagttcacctggaaccagttctgtgactggtatctggagctgact
aagccggtaatgaacggtggaaccgaagccgaactgcgcggtactcgccatacgctggtg
accgtactggaaggtctgctgcgcctcgcgcatccgatcattccgttcatcaccgaaacc
atctggcagcgtgtgaaagtactttgcggtatcactgccgacaccatcatgctgcagccg
ttcccgcagtacgatgcatctcaggttgatgaagccgcactggccgacaccgaatggctg
aaacaggcgatcgttgcggtacgtaacatccgtgcagaaatgaatatcgcgccgggcaaa
ccgctggagctgctgctgcgtggttgcagcgcggatgcagaacgtcgcgtaaatgaaaac
cgtggcttcctgcaaaccctggcgcgtctggaaagcatcaccgtgctgcctgccgatgac
aaaggtccggtttccgttgcgaagatcatcgacggcgcagagctgctgatcccgatggct
ggcctcatcaacaaagaagatgagctggcgcgtctggcgaaagaagtggcgaagatcgaa
ggcgaaatcagccgtatcgagaacaagctggcgaatgaaggctttgtcgcccgcgcaccg
gaagcggtcatcgcgaaagagcgtgagaagctggaaggctatgcagaagcgaaagctaag
ctgattgaacagcaggctgttatcgccgcgctgtaa
DBGET
integrated database retrieval system
