KEGG   Shigella sp. PAMC 28760: A0259_03435
Entry
A0259_03435       CDS       T04390                                 
Name
(GenBank) restriction endonuclease
  KO
K07452  5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
Organism
shq  Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:shq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shq02048]
    A0259_03435
Prokaryotic defense system [BR:shq02048]
 Restriction and modification system (R-M system)
  Type IV R-M system
   A0259_03435
SSDB
Motif
Pfam: AAA_5 MrcB_N AAA AAA_22 nSTAND3 NACHT Mg_chelatase AAA_14 IstB_IS21 AAA_16 AAA_7 AAA_19 ResIII AAA_2 AAA_18 SLFN-g3_helicase ORC-CDC6-like AAA_24 RNA_helicase bpMoxR RuvB_N AAA_25 AAA_3 AAA_33 DEAD TsaE AAA_11 KTI12 NPHP3_N nSTAND_NTPase5 Sigma54_activat
Other DBs
NCBI-ProteinID: AMR21749
LinkDB
Position
complement(704666..706045)
AA seq 459 aa
MESIQAWIEKFIEQAQQKSSQSTKDYPTSYRNLRVKVSFGYGNFTSIPWFAFLGEGQEVS
NGIYPVILYYKDFDELVLAYGISDTNKPHAQWQFSSDIPKTIAEYFQTTSGVYPKKYGQS
YYACSQKVSQGLDYTRFASMLDNIINDYKLIFNSGKSVIPPMSKTESYCLEDALNDLFIP
ETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYED
FIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYVFIIDEINRANLSKVFGEVMMLMEHD
KRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFD
TPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCSGLEDGTSP
DTQWLKEIVMTDIAPLLEEYFFDDPYKQQIWADKLLGDS
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggaatcaattcaagcctggattgaaaaatttattgagcaagcacagcaaaaaagttca
caatccaccaaagattatccaacgtcttaccgtaacctgcgagtaaaagtgagtttcggt
tatggcaattttacatctattccctggtttgcatttctgggagaaggtcaggaagtttct
aacggtatatatcccgttattctctattataaagattttgatgagttggttttggcttat
ggtataagcgacacgaataaaccacatgcccaatggcagttctcttcagacatacctaaa
acaatcgcagagtatttccagacaacttcaggtgtttatcctaaaaaatacggacagtcc
tattacgcctgttcccaaaaagtctcacagggtcttgattatacccggtttgcctccatg
ctggacaacataatcaacgactataaattaatatttaattctggcaagagtgttattcca
cctatgtcaaaaactgaatcatactgtctggaagatgcgttaaatgatttgtttatccct
gaaaccacgatagagacgatactcaaacgattaaccatcaaaaaaaatattatcctccag
gggccgcccggcgttggaaaaacctttgttgcacgccgtctggcttacctgctgacagga
gaaaaggctccgcaacgcgtcaatatggttcagttccatcaatcttatagctatgaggat
tttatacagggctatcgtccgaatggcgtcggcttccgacgtaaagacggcatattttac
aatttttgtcagcaagctaaagagcagccagagaaaaagtatgtttttattatagatgaa
atcaatcgtgccaatctcagtaaagtatttggcgaagtgatgatgttaatggaacatgat
aaacgaggtgaaaactggtctgttcccttaacctattccgaaaacgatgaagaacgattc
tatgtcccggagaatgtttatattatcggtttaatgaatactgccgatcgctctctggcc
gttgttgattatgccctgcgcagacgattttctttcatagatattgagcctggttttgat
acaccacagttccgtaattttttactgaataaaaaagcagaaccttcatttgttgagtct
ttatgccaaaaaatgaatgagttaaaccaggaaatcagcaaagaggccactatccttggg
aaaggattccgcattgggcatagttacttctgctccgggttggaagatggcacctctcct
gatacgcaatggcttaaggaaattgtgatgacggatatcgcccctttactcgaagaatat
ttctttgatgacccctataaacaacagatatgggccgacaaattattaggtgactcatag

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