Shigella sp. PAMC 28760: A0259_03470 Help Entry A0259_03470       CDS       T04390                                  Name (GenBank) DEAD/DEAH box helicase   KO K01153   type I restriction enzyme, R subunit [EC:3.1.21.3] Organism shq  Shigella sp. PAMC 28760 Brite KEGG Orthology (KO) [BR:shq00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:shq02048]     A0259_03470 Enzymes [BR:shq01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters     3.1.21.3  type I site-specific deoxyribonuclease      A0259_03470 Prokaryotic defense system [BR:shq02048]  Restriction and modification system (R-M system)   Type I R-M system    A0259_03470 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 PhoH Flavi_DEAD UvrD-helicase SLFN-g3_helicase AAA_19 MRP-S26 Motif Other DBs NCBI-ProteinID:  AMR21753 LinkDB All DBs Position complement(710763..714275) Genome browser AA seq 1170 aa AA seqDB search MMNKSNFEFLKGVNDFTYAIACAAENNYPDDPNTTLIKMRMFGEATAKHLGLLLNIPPCE NQHDLLRELGKIAFVDDNILSVFHKLRRIGNQAVHEYHNDLDDAQMCLRLGFRLAVWYYR LVTKDYDFPVPVFVLPERGENLYHQEVLTLKQQLEQQVREKAQSQAEVEAQQQKLVALNG YIAILEGKQQETEAQTQARLAALEAQLAEKNAELAKQTEQERKAYHKEITDQAIKRTLNL SEEESRFLIDAQLRKAGWQADSKTLRFSKGARPEPGVNKAIAEWPTGKDETGNQGFADYV LFVGLKPIAVVEAKRKNIDVPGKLNESYRYSKCFDNGFLRETLLEHYSPDEVHEAVPEYE TSWQDTSGQQRFKIPFCYSTNGREYRAAMKIKSGIWYRDVRDTRNMSKALPEWHRPEELL EMLGSEPQKQNQWFADNPGMSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRT AIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPED STKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYV SAYRRILDHFDAVKIALTATPALHTVQIFGEPVYRYTYRTAVIDGFLIDQDPPIQITTRN AQEGVYLSKGEQVERISPQGEVINDTLEDDQDFEVADFNRGLVIPAFNRAVCNELTNYLD PTGSQKTLVFCVTNAHADMVVEELRTAFKKKYPQLEHDAIIKITGDADKDARKVQTMITR FNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVRSRILYEQMKGRATRLCPEVNKTSFK IFDCVDIYSTLESVDTMRPVVVRPKVELQTLVNEITDSETYKITEADGRSFAEHSHEQLV AKLQRIIGLATFNRDRSETIDKQVRRLDELCQDAAGVNFNGFASRLREKGPHWSAEVFNK LPGFIARLEKLKTDINNLNDAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDSLVQRSPN AQPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRKAWQETRNEDIAARLIGHIRRA AVGDALKPFEERVDHALTRIKGENDWSSEQLSWLDRLAQALKEKVVLDDDVFKTGNFHRR GGKAMLQRTFDDNLDNLLDKFSDYIWDELA NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atgatgaataaatccaattttgaattcctgaagggcgtcaacgactttacctatgccatc gcctgtgcggcggaaaataactacccggatgatcccaacacgacgctgattaaaatgcgt atgtttggcgaagccacagcgaaacatcttggtctgttactcaacatccccccttgtgag aatcaacacgatctcctgcgcgaactcggcaaaatcgccttcgttgatgacaacattctc tctgtattccacaaattacgccgcattggtaaccaggcggtgcacgaatatcataacgat ctcgacgatgcccagatgtgcctgcgactcgggtttcgcctggctgtctggtactaccgt ctggtcactaaagattatgacttcccggtgccggtgtttgtgttgccggaacgtggtgaa aacctctatcaccaggaagtgctgacgctaaaacaacagcttgaacagcaggtgcgagaa aaagcgcagagtcaggcagaagtcgaagcacaacagcagaagctggttgccctgaacggc tatatcgccattctggaaggcaagcagcaggaaaccgaagcgcaaacccaggctcgcctt gctgcactggaagcacagctcgccgagaagaacgcggaactggccaagcagaccgaacag gaacgtaaggcttaccacaaagaaattaccgatcaggccatcaagcgtacactcaatctt agcgaagaagagagccgcttcctgattgacgcgcaactgcgtaaagcaggctggcaggcc gatagcaaaaccctgcgcttctccaaaggcgcgcgcccggaacccggcgtcaataaagcc attgccgaatggccgaccgggaaagatgaaacgggtaatcagggctttgcggattatgtg ctgtttgtcggtctcaaacccatcgcggtggtagaagcgaaacgtaaaaatatcgacgtt cccggcaagctcaatgagtcgtatcgctacagtaaatgtttcgataatggcttcctgcgg gaaaccttgcttgagcactattcaccagatgaagtgcatgaagcggtgccagagtatgaa accagctggcaggacaccagcggccaacaacggtttaaaatccccttctgctactcaacc aacgggcgcgaataccgcgcagcgatgaagattaaaagcggcatctggtatcgcgacgtg cgtgatacccgcaatatgtcgaaagccttacccgagtggcaccgcccggaagagctgctg gaaatgctcggcagcgaaccgcaaaaacagaatcagtggtttgccgataaccctggcatg agtgagctgggcctgcgttattatcaggaagatgccgtccgcgcggttgaaaaggcaatc gtcaaggggcaacaagagatcctgctggcgatggcaaccggtaccggtaaaacccgtacg gcaattgccatgatgttccgcctgatccagtcccagcgttttaaacgcattctcttcctt gtcgaccgccgttctcttggcgaacaggcgctgggcgcgtttgaagatacgcgtattaac ggcgacacctttaacagcattttcgacattaaagggctgacggataaattccctgaagac agcaccaaaattcacgttgccaccgtacagtcgctggtgaaacgcaccctgcaatcggat gaaccgatgccggtagcccgttacgactgtatcgtcgtcgatgaagcgcatcgcggctac attctcgataaagagcagaccgaaggcgaactacagttccgcagtcagctggattacgtc tctgcctaccgtcgtattctcgatcacttcgatgcggtaaaaatcgctctcaccgccacc ccggctctgcatacggtgcagattttcggcgagccggtttaccgttacacctaccgtacc gcggttatcgacggttttctgatcgaccaggatccgccgattcagatcaccacccgcaac gcccaggaaggggtttatctctccaaaggcgagcaggttgagcgcatcagcccgcagggg gaagtgatcaacgacaccctggaagacgatcaggattttgaggtcgccgactttaaccgt ggcctggtgatcccggcgtttaaccgcgccgtctgtaacgaactcaccaactaccttgac ccgaccgggtcacaaaaaacgctggtcttctgcgtcaccaatgcccatgccgatatggtg gtggaagagctgcgtaccgcgttcaagaaaaagtatccacaactggagcacgacgcgatc atcaagatcaccggtgatgccgataaagacgcgcgaaaagtgcagaccatgatcacccgc ttcaataaagagcggctgcccaatatcgtggtcaccgtcgacctgctgacgaccggcgtc gatattccgtcgatctgtaatatcgtgttcctgcgcaaggtacgcagccgtattctgtac gagcagatgaaagggcgcgccacgcgcttatgcccggaggtgaataaaaccagctttaag attttcgactgtgtcgatatctacagcacgctggagagcgtcgacaccatgcgtccggtg gtggtgcgtccgaaggtggaactgcaaacgctggtcaacgaaattaccgattcagaaacc tataaaatcaccgaagcggatggccgcagttttgccgagcacagccatgaacaactggtg gcgaagctccagcgcatcatcggcctggccacgtttaaccgtgaccgcagcgaaacgata gacaaacaggtgcgtcgtctggatgagctatgccaggacgcggcgggggttaactttaac ggcttcgcctcgcgcctgcgggaaaaagggccgcactggagcgccgaagtctttaacaaa ctacctggctttatcgcccgtctggaaaagctgaaaaccgacatcaacaacctgaatgat gcgccgatcttcctcgatatcgacgatgaagtggtgagcgtaaaatcgctgtacggtgat tacgacacgccgcaggatttcctcgaagcctttgactcgctggtgcaacgttccccgaat gcacagccggcattgcaggcggtgattaatcgcccgcgcgatctcacccgtaaagggctg gtcgagctacaggagtggtttgaccgccagcactttgaggaatcttccctgcgcaaagca tggcaagagacgcgcaatgaagatatcgccgcccggctgattggacatattcgccgcgct gcggtgggcgatgcgctgaaaccgtttgaggaacgtgtcgatcacgcgctgacgcgcatt aagggcgaaaatgactggagcagcgagcaattaagctggctcgatcgtttagcgcaggcg ctgaaagagaaagtggtgctcgacgacgatgtcttcaaaaccggcaacttccaccgtcgc ggcgggaaggcgatgctgcaaagaacctttgacgataatctcgacaacctgctcgataaa ttcagcgattacatttgggacgagctggcctga

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