Shigella sp. PAMC 28760: A0259_04585
Help
Entry
A0259_04585 CDS
T04390
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00550
Peptidoglycan biosynthesis
shq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A0259_04585 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shq01003
]
A0259_04585 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shq01011
]
A0259_04585 (mrcB)
Enzymes [BR:
shq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
A0259_04585 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A0259_04585 (mrcB)
Glycosyltransferases [BR:
shq01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
A0259_04585 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
shq01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
A0259_04585 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
AMR21959
LinkDB
All DBs
Position
946933..949458
Genome browser
AA seq
841 aa
AA seq
DB search
MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPR
GKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTIS
KNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHL
ATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEH
DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDAR
YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIY
NPWRNPKLALERRNLVLRLLQQQQIIDGELYEMLSARPLGVQPRGGVISPQPAFMQLVRQ
ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRF
SGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIAL
RQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPK
DQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAER
AVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTI
TWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGM
RVLPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQQPAQQEQKDSDGVAGWIKDMFGS
N
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaatgaccgcgagccaattggacgcaaagggaaaccgacgcgtccggtcaaa
caaaaggtaagccgtcgtcgttacgaagatgacgatgattacgacgattatgatgactat
gaggatgaagaaccgatgccgcgcaaaggtaagggcaaaggcaaagggcgtaagcctcgt
ggcaaacgcggctggctatggctactgctaaaactggctatcgtttttgccgtgctgatc
gccatttacggcgtttatctcgatcaaaaaattcgtagccgtattgatggcaaggtctgg
caactgcctgcggcagtttatggccgaatggtcaatcttgagccagacatgaccatcagc
aagaacgagatggtgaagctgctggaggcgacccagtatcgtcaggtgtcgaaaatgacc
cgtcctggcgaatttaccgtgcaggctaacagcattgagatgatccgccgtccgtttgat
ttcccggacagcaaagaagggcaggtgcgtgcgcgtttgacctttgatggcgatcatctg
gcgaccatcgtcaatatggagaacaaccgtcagttcggcttcttccgtcttgatccgcgc
ctgatcaccatgatctcctcgccaaacggtgaacaacgtctgtttgtgccgcgcagtggt
ttccctgatttgctggtggatactttgctggcgacagaagaccgtcatttttacgagcat
gacggcatcagcctctactccatcggacgtgcggtgctggcaaacctgaccgcaggtcgc
acggtgcagggtgcgagtacgctgacgcaacagctggtgaaaaacctgttcctctccagc
gagcgctcttactggcgtaaagcgaacgaagcctatatggcgttgatcatggatgcgcgt
tacagcaaagatcgcattcttgagctgtatatgaatgaggtgtatctcggtcagagcggc
gacaacgaaattcgtggcttcccgctggcgagcctgtactactttggtcgcccggtagaa
gaattgagccttgaccagcaggcgctgttagttggcatggtgaaaggggcgtccatctac
aacccgtggcgtaacccgaaactggcgctggagcgacgtaatctggtgctgcgtttgcta
caacaacagcagattatcgatggtgaactgtatgaaatgctcagcgcgcgtcctctgggc
gtacagccgcgcggtggggtaatctctccacagccagcctttatgcaattggtgcgtcag
gagctgcaagcgaaattaggcgataaggtaaaagatctctccggcgtgaagatcttcact
acctttgactcggtggcccaggacgcggcagaaaaagccgccgtggaaggcattcctgca
ctgaagaaacagcgtaagttgagcgatcttgaaactgcgattgtggtcgtcgaccgcttt
agtggtgaagttcgtgcgatggtcggaggttctgagccgcagtttgcgggctacaaccgt
gcgatgcaggcgcgtcgttcgattggttcccttgcaaaaccagcgacttatctgacggcc
ttaagccagccgaaaatctatcgtctgaatacgtggattgcggatgcgccaattgcgctg
cgtcagccgaatggccaggtctggtcaccgcagaacgatgatcgtcgttatagcgaaagt
ggcagagtgatgctggtggatgcgttgacccgttcgatgaacgtgccgacggtaaatctg
gggatggcgctggggctgcctgcggttacggagacctggatcaaactgggcgtaccgaaa
gatcagttgcatccggttccggcgatgctgctgggggcgttgaacttaacgccaatcgaa
gtggcgcaggcattccagaccatcgccagcggtggtaaccgtgcaccgctttctgcactg
cgttcggtaatcgcggaagatggcaaagtgctgtatcagagcttcccgcaggcggaacgc
gctgttccggcgcaggcggcgtatctgacactatggaccatgcagcaggttgtacaacgc
ggtacgggtcgtcagcttggggcgaaatacccgaacctgcatctggcagggaaaacaggg
actaccaacaataacgtagatacctggtttgcgggcattgacggcagcacggtgaccatc
acctgggtaggccgtgataacaaccagccgaccaaactgtatggagccagcggggcaatg
tcgatttatcagcgttatctggctaaccagacgccaacaccgctgaatcttgttccgcca
gaagatattgcagatatgggcgtggactacgacggcaactttgtttgcagcggtggcatg
cgtgtcttgccggtctggaccagcgatccgcaatcgctgtgccagcagagtgagatgcag
cagcaaccgtcaggcaatccgtttgatcagtcttctcagccgcagcaacagcaacctgct
cagcaagagcagaaagacagcgacggtgtagccggttggattaaagatatgtttggtagt
aattaa
DBGET
integrated database retrieval system
